RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 A6NNZ2 444 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 PSMA7O14818 248 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 CTSLP07711 333 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 IRAK1P51617 712 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 CDK17Q00537 523 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 VAC14Q08AM6 782 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 MTA1Q13330 715 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 AUHQ13825 339 aaKnown RBP14.98□□□□□ -0.01
MCF2L-220ENST00000464800 GCNT7Q6ZNI0 430 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 PTAR1Q7Z6K3 402 aaPredicted RBP14.98□□□□□ -0.01
MCF2L-220ENST00000464800 TMEM110Q86TL2 294 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 SLC22A18ASQ8N1D0 253 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 FAM181AQ8N9Y4 354 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 IFI44Q8TCB0 444 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 MAPK15Q8TD08 544 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 VCPIP1Q96JH7 1222 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 CEP63Q96MT8 703 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 KREMEN1Q96MU8 473 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 GTPBP4Q9BZE4 634 aaKnown RBP14.98□□□□□ -0.01
MCF2L-220ENST00000464800 MUC3BQ9H195 1237 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 GDPD2Q9HCC8 539 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 ASCL3Q9NQ33 180 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 DNAJC28Q9NX36 388 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 VANGL2Q9ULK5 521 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 CNTN6Q9UQ52 1028 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 HS3ST2Q9Y278 367 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 OR51B4Q9Y5P0 310 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 TRPM6Q9BX84 2022 aa14.98□□□□□ -0.01
MCF2L-220ENST00000464800 LY6G6EA0A0G2JKS1 128 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 SCAMP1O15126 338 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 LZTS3O60299 673 aaPredicted RBP14.97□□□□□ -0.01
MCF2L-220ENST00000464800 CLDN11O75508 207 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 LETM1O95202 739 aaPredicted RBP14.97□□□□□ -0.01
MCF2L-220ENST00000464800 PCDH8O95206 1070 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 SMC2O95347 1197 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 PRNPP04156 253 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 SRCP12931 536 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 MYF5P13349 255 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 C6P13671 934 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 CHRNA3P32297 505 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 CLDN2P57739 230 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 HNRNPKP61978 463 aaKnown RBP eCLIP14.97□□□□□ -0.01
MCF2L-220ENST00000464800 KRT83P78385 493 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 PDCLQ13371 301 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 STIM1Q13586 685 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 LY6DQ14210 128 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 TAF5Q15542 800 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 C3orf38Q5JPI3 329 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 ABI3BPQ7Z7G0 1075 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 ATP11CQ8NB49 1132 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 FAM174AQ8TBP5 190 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 SNRNP27Q8WVK2 155 aaKnown RBP14.97□□□□□ -0.01
MCF2L-220ENST00000464800 SMARCE1Q969G3 411 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 ARRDC3Q96B67 414 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 NOX5Q96PH1 765 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 SLC2A13Q96QE2 648 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 SEMA4CQ9C0C4 833 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 OSBPL2Q9H1P3 480 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 CAAP1Q9H8G2 361 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 SATB2Q9UPW6 733 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 U3KQA8 63 aa14.97□□□□□ -0.01
MCF2L-220ENST00000464800 H3BM21 787 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 K7ESM1 405 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 MAST4O15021 2626 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 THAP12O43422 761 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 HSF2BPO75031 334 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 NEBLO76041 1014 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 GLI1P08151 1106 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 RBMS1P29558 406 aaKnown RBP14.96□□□□□ -0.01
MCF2L-220ENST00000464800 GNA15P30679 374 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 ISXQ2M1V0 245 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 ZNF542PQ5EBM4 170 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 SEL1L3Q68CR1 1132 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 OR6B2Q6IFH4 312 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 ZCCHC8Q6NZY4 707 aaKnown RBP14.96□□□□□ -0.01
MCF2L-220ENST00000464800 IGF2-ASQ6U949 168 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 Q6ZSR6 202 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 ERN2Q76MJ5 926 aaKnown RBP14.96□□□□□ -0.01
MCF2L-220ENST00000464800 DCP2Q8IU60 420 aaKnown RBP14.96□□□□□ -0.01
MCF2L-220ENST00000464800 DEFB106AQ8N104 65 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 EHBP1Q8NDI1 1231 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 ZNF548Q8NEK5 533 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-220ENST00000464800 TMIEQ8NEW7 156 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 OR2A12Q8NGT7 310 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 GRIN3AQ8TCU5 1115 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 TTC9Q92623 222 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 PPP1R16AQ96I34 528 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 C2orf49Q9BVC5 232 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-220ENST00000464800 NCKIPSDQ9NZQ3 722 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 ZFR2Q9UPR6 939 aaKnown RBP14.96□□□□□ -0.01
MCF2L-220ENST00000464800 TBC1D30Q9Y2I9 924 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 HS3ST4Q9Y661 456 aa14.96□□□□□ -0.01
MCF2L-220ENST00000464800 B8ZZF3 427 aa14.95□□□□□ -0.02
MCF2L-220ENST00000464800 MT-CO1P00395 513 aa14.95□□□□□ -0.02
MCF2L-220ENST00000464800 GGCXP38435 758 aa14.95□□□□□ -0.02
MCF2L-220ENST00000464800 CDH4P55283 916 aa14.95□□□□□ -0.02
MCF2L-220ENST00000464800 NME3Q13232 169 aa14.95□□□□□ -0.02
MCF2L-220ENST00000464800 TMEM259Q4ZIN3 620 aa14.95□□□□□ -0.02
MCF2L-220ENST00000464800 EFHC1Q5JVL4 640 aa14.95□□□□□ -0.02
MCF2L-220ENST00000464800 KYAT3Q6YP21 454 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms