RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 CBX4O00257 560 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 FGF10O15520 208 aaPredicted RBP16.64■□□□□ 0.25
SSNA1-204ENST00000464553 RNASEH2AO75792 299 aaKnown RBP16.64■□□□□ 0.25
SSNA1-204ENST00000464553 MT-CO1P00395 513 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 PRNPP04156 253 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 CSRP1P21291 193 aaKnown RBP16.64■□□□□ 0.25
SSNA1-204ENST00000464553 RECQLP46063 649 aaPredicted RBP16.64■□□□□ 0.25
SSNA1-204ENST00000464553 AFF3P51826 1226 aaKnown RBP16.64■□□□□ 0.25
SSNA1-204ENST00000464553 SEMA3BQ13214 749 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 TDRD12Q587J7 1177 aaKnown RBP16.64■□□□□ 0.25
SSNA1-204ENST00000464553 FAM72AQ5TYM5 149 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 KIAA0895LQ68EN5 471 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 SPECC1LQ69YQ0 1117 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 FAM72DQ6L9T8 149 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 IL27RAQ6UWB1 636 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 FAM72BQ86X60 149 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 HDDC3Q8N4P3 179 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 PCDH20Q8N6Y1 951 aaKnown RBP16.64■□□□□ 0.25
SSNA1-204ENST00000464553 RTL3Q8N8U3 475 aaKnown RBP16.64■□□□□ 0.25
SSNA1-204ENST00000464553 CASKIN2Q8WXE0 1202 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 ARHGEF2Q92974 986 aaKnown RBP16.64■□□□□ 0.25
SSNA1-204ENST00000464553 SPON2Q9BUD6 331 aa16.64■□□□□ 0.25
SSNA1-204ENST00000464553 C6orf106Q9H6K1 298 aaPredicted RBP16.64■□□□□ 0.25
SSNA1-204ENST00000464553 SNAP91O60641 907 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 RAMP2O60895 175 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 GYPCP04921 128 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 PSMA2P25787 234 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 MAOBP27338 520 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 EPHB2P29323 1055 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 PCK1P35558 622 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 HCAR3P49019 387 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 SERPINH1P50454 418 aaKnown RBP16.63■□□□□ 0.25
SSNA1-204ENST00000464553 POLD3Q15054 466 aaPredicted RBP16.63■□□□□ 0.25
SSNA1-204ENST00000464553 TEAD4Q15561 434 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 TSR1Q2NL82 804 aaKnown RBP16.63■□□□□ 0.25
SSNA1-204ENST00000464553 ERMARDQ5T6L9 678 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 CACUL1Q86Y37 369 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 UMODL1-AS1Q8N2C9 162 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 OR7D4Q8NG98 312 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 OR2A12Q8NGT7 310 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 CPLX3Q8WVH0 158 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 BIRC7Q96CA5 298 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 ZNF653Q96CK0 615 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 LRIG1Q96JA1 1093 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.63■□□□□ 0.25
SSNA1-204ENST00000464553 DNAAF2Q9NVR5 837 aaKnown RBP16.63■□□□□ 0.25
SSNA1-204ENST00000464553 EIF2B4Q9UI10 523 aaKnown RBP16.63■□□□□ 0.25
SSNA1-204ENST00000464553 NEU3Q9UQ49 428 aa16.63■□□□□ 0.25
SSNA1-204ENST00000464553 TNRC6BQ9UPQ9 1833 aaKnown RBP16.63■□□□□ 0.25
SSNA1-204ENST00000464553 A0A1W2PP55 124 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 A0A1W2PPC4 97 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 KDELR3O43731 214 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 OPHN1O60890 802 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 TPM1P09493 284 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 CEACAM1P13688 526 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 CASP14P31944 242 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 CHRNA3P32297 505 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 PSMD8P48556 350 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 OGDHQ02218 1023 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 HNRNPDQ14103 355 aaKnown RBP16.62■□□□□ 0.25
SSNA1-204ENST00000464553 PIGHQ14442 188 aaPredicted RBP16.62■□□□□ 0.25
SSNA1-204ENST00000464553 PARP15Q460N3 678 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 BOLA3Q53S33 107 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 INO80DQ53TQ3 878 aaPredicted RBP16.62■□□□□ 0.25
SSNA1-204ENST00000464553 NEK5Q6P3R8 708 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 ALKBH5Q6P6C2 394 aaKnown RBP16.62■□□□□ 0.25
SSNA1-204ENST00000464553 Q6ZVU0 165 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 AADATQ8N5Z0 425 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 OR8K1Q8NGG5 319 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 PIP4K2CQ8TBX8 421 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 SKA1Q96BD8 255 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 MIR1-1HGQ9H1L0 117 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 LCMT1Q9UIC8 334 aa16.62■□□□□ 0.25
SSNA1-204ENST00000464553 ATXN2Q99700 1313 aaKnown RBP16.62■□□□□ 0.25
SSNA1-204ENST00000464553 SMAD6O43541 496 aaKnown RBP16.61■□□□□ 0.25
SSNA1-204ENST00000464553 PRPSAP2O60256 369 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 DFNA5O60443 496 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 ZNF883P0CG24 379 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 VAV1P15498 845 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 DRD3P35462 400 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 GRIA4P48058 902 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 RACK1P63244 317 aaKnown RBP16.61■□□□□ 0.25
SSNA1-204ENST00000464553 CARD16Q5EG05 197 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 PPM1JQ5JR12 505 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 C22orf39Q6P5X5 142 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 NCEH1Q6PIU2 408 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.61■□□□□ 0.25
SSNA1-204ENST00000464553 OR14C36Q8NHC7 312 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 PPP1R16AQ96I34 528 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 DNAJC7Q99615 494 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 ZNHIT6Q9NWK9 470 aaKnown RBP16.61■□□□□ 0.25
SSNA1-204ENST00000464553 DNAI1Q9UI46 699 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 AP4E1Q9UPM8 1137 aa16.61■□□□□ 0.25
SSNA1-204ENST00000464553 CEP192Q8TEP8 1941 aa16.6■□□□□ 0.25
SSNA1-204ENST00000464553 A0A087X0T9 212 aa16.6■□□□□ 0.25
SSNA1-204ENST00000464553 K7ERQ8 282 aa16.6■□□□□ 0.25
SSNA1-204ENST00000464553 LATO43561 262 aa16.6■□□□□ 0.25
SSNA1-204ENST00000464553 PLRG1O43660 514 aaKnown RBP16.6■□□□□ 0.25
SSNA1-204ENST00000464553 CREB3O43889 395 aa16.6■□□□□ 0.25
SSNA1-204ENST00000464553 ZNF821O75541 412 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms