RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 WBP1Q96G27 269 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 CCDC114Q96M63 670 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 DEPDC7Q96QD5 511 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 GPR27Q9NS67 375 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 NLGN3Q9NZ94 848 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 VANGL2Q9ULK5 521 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 TDRD6O60522 2096 aaKnown RBP17.72■□□□□ 0.43
HMGN1-210ENST00000464078 COL27A1Q8IZC6 1860 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-210ENST00000464078 SLC31A1O15431 190 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 THAP12O43422 761 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 AFPP02771 609 aaKnown RBP17.72■□□□□ 0.43
HMGN1-210ENST00000464078 CTSLP07711 333 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 ALPPL2P10696 532 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 HNRNPA2B1P22626 353 aaKnown RBP17.72■□□□□ 0.43
HMGN1-210ENST00000464078 AKT2P31751 481 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 CDH4P55283 916 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 ERVPABLB-1P60509 514 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 TMEM259Q4ZIN3 620 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 SMYD5Q6GMV2 418 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 ZNF605Q86T29 641 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 ELOA2Q8IYF1 753 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-210ENST00000464078 SLC22A18ASQ8N1D0 253 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 FAM181AQ8N9Y4 354 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 OR13H1Q8NG92 308 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 OR2A12Q8NGT7 310 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 RNF34Q969K3 372 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 CPXM1Q96SM3 734 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 C2orf49Q9BVC5 232 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-210ENST00000464078 FARP1Q9Y4F1 1045 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-210ENST00000464078 HS3ST4Q9Y661 456 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 SPTA1P02549 2419 aa17.72■□□□□ 0.43
HMGN1-210ENST00000464078 TRPM6Q9BX84 2022 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 NAV2Q8IVL1 2488 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 LY6G6EA0A0G2JKS1 128 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 BICDL2A1A5D9 508 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 KPNA3O00505 521 aaPredicted RBP17.71■□□□□ 0.43
HMGN1-210ENST00000464078 FFAR2O15552 330 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 PAGE1O75459 146 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 PRNPP04156 253 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 CHRNA3P32297 505 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 LSSP48449 732 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 CLCN6P51797 869 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 TMPRSS3P57727 454 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 KRT83P78385 493 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 RHDQ02161 417 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 CFHR1Q03591 330 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 IGF2-ASQ6U949 168 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 GCNT7Q6ZNI0 430 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 FAM81BQ96LP2 452 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 APOLD1Q96LR9 279 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 PSMB7Q99436 277 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 MYOCQ99972 504 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 HDAC8Q9BY41 377 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 MUC3BQ9H195 1237 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 UBE2TQ9NPD8 197 aaPredicted RBP17.71■□□□□ 0.43
HMGN1-210ENST00000464078 ACP6Q9NPH0 428 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 MAN1B1Q9UKM7 699 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.71■□□□□ 0.43
HMGN1-210ENST00000464078 U3KQA8 63 aa17.71■□□□□ 0.43
HMGN1-210ENST00000464078 SYNJ2BP-COX16A0A087WUM0 186 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 GOLGA6L4A6NEF3 574 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 NEMP2A6NFY4 417 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 PPP1R3GB7ZBB8 358 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 RIOK3O14730 519 aaKnown RBP17.7■□□□□ 0.42
HMGN1-210ENST00000464078 DAB1O75553 588 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 MT-CO1P00395 513 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 GABREP78334 506 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 OLFML1Q6UWY5 402 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 SLC26A9Q7LBE3 791 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 DCP2Q8IU60 420 aaKnown RBP17.7■□□□□ 0.42
HMGN1-210ENST00000464078 WDTC1Q8N5D0 677 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 DCAF4L2Q8NA75 395 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 SNRNP27Q8WVK2 155 aaKnown RBP17.7■□□□□ 0.42
HMGN1-210ENST00000464078 NELFBQ8WX92 580 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 COL26A1Q96A83 441 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 ARRDC3Q96B67 414 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 PPP1R13BQ96KQ4 1090 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 DUSP23Q9BVJ7 150 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 CALN1Q9BXU9 219 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 POLR1BQ9H9Y6 1135 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 EVA1BQ9NVM1 165 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 COX16Q9P0S2 106 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 VPS51Q9UID3 782 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 PCDHGC3Q9UN70 934 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 HECTD1Q9ULT8 2610 aa17.7■□□□□ 0.42
HMGN1-210ENST00000464078 A6NNZ2 444 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 BECN2A8MW95 431 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 SCAMP1O15126 338 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 BNIP3LO60238 219 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 CSO75390 466 aaKnown RBP17.69■□□□□ 0.42
HMGN1-210ENST00000464078 MPOP05164 745 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 BMP6P22004 513 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 DUSP3P51452 185 aaPredicted RBP17.69■□□□□ 0.42
HMGN1-210ENST00000464078 OTUD1Q5VV17 481 aaPredicted RBP17.69■□□□□ 0.42
HMGN1-210ENST00000464078 BROXQ5VW32 411 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 KLHL10Q6JEL2 608 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 TRIM65Q6PJ69 517 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 C11orf57Q6ZUT1 292 aaPredicted RBP17.69■□□□□ 0.42
HMGN1-210ENST00000464078 ERN2Q76MJ5 926 aaKnown RBP17.69■□□□□ 0.42
HMGN1-210ENST00000464078 TMC6Q7Z403 805 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms