RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 BCAT1P54687 386 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 CYTH1Q15438 398 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 KIZQ2M2Z5 673 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 IL23RQ5VWK5 629 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 LSMEM2Q8N112 164 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 ANKRD52Q8NB46 1076 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 ATP6V1E2Q96A05 226 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 PHF12Q96QT6 1004 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 MCMBPQ9BTE3 642 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 CHRAC1Q9NRG0 131 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 COPG1Q9Y678 874 aaKnown RBP18.76■□□□□ 0.59
HPS3-204ENST00000462030 GJA3Q9Y6H8 435 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 TCAF2A6NFQ2 919 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 TMEM233B4DJY2 109 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 TIMM44O43615 452 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 ZNF26P17031 533 aaPredicted RBP18.76■□□□□ 0.59
HPS3-204ENST00000462030 LMO2P25791 158 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 HSPA13P48723 471 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 CREB5Q02930 508 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 PRKAA1Q13131 559 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 NLRP7Q8WX94 980 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 SEMA6AQ9H2E6 1030 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 EFCAB1Q9HAE3 211 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 CASS4Q9NQ75 786 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 CEPT1Q9Y6K0 416 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 C7orf72A4D263 438 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 SLC22A2O15244 555 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 CYP2C8P10632 490 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 TPH1P17752 444 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 NR1H2P55055 460 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 HERC3Q15034 1050 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 MGAT5BQ3V5L5 792 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 DCAF6Q58WW2 860 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 GLRA4Q5JXX5 417 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 DDI1Q8WTU0 396 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 KCTD4Q8WVF5 259 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 C18orf25Q96B23 403 aaPredicted RBP18.75■□□□□ 0.59
HPS3-204ENST00000462030 SCYL1Q96KG9 808 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 IL22Q9GZX6 179 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 RNF11Q9Y3C5 154 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 A0A0J9YVX5 310 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 ARHGAP10A1A4S6 786 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 TADA2AO75478 443 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 NELFEP18615 380 aaKnown RBP18.75■□□□□ 0.59
HPS3-204ENST00000462030 CDH2P19022 906 aaPredicted RBP18.75■□□□□ 0.59
HPS3-204ENST00000462030 SLC26A2P50443 739 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 PAFAH1B3Q15102 231 aaKnown RBP18.75■□□□□ 0.59
HPS3-204ENST00000462030 SLC25A52Q3SY17 297 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 SH2D4BQ5SQS7 431 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 CHERPQ8IWX8 916 aaKnown RBP18.75■□□□□ 0.59
HPS3-204ENST00000462030 MLPHQ9BV36 600 aaPredicted RBP18.75■□□□□ 0.59
HPS3-204ENST00000462030 PDGFCQ9NRA1 345 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 RHBDL2Q9NX52 303 aa18.75■□□□□ 0.59
HPS3-204ENST00000462030 ZBTB24O43167 697 aaPredicted RBP18.74■□□□□ 0.59
HPS3-204ENST00000462030 PSMC3P17980 439 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 SCNN1AP37088 669 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 SCNN1BP51168 640 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 CSE1LP55060 971 aaKnown RBP18.74■□□□□ 0.59
HPS3-204ENST00000462030 DPYSQ14117 519 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 PTK2BQ14289 1009 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 KLC3Q6P597 504 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 BORAQ6PGQ7 559 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 GK5Q6ZS86 529 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 IFNLR1Q8IU57 520 aaPredicted RBP18.74■□□□□ 0.59
HPS3-204ENST00000462030 SLC2A14Q8TDB8 520 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 GAB3Q8WWW8 586 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 ITFG2Q969R8 447 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 EME1Q96AY2 570 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 ZNF512Q96ME7 567 aaPredicted RBP18.74■□□□□ 0.59
HPS3-204ENST00000462030 UNKQ9C0B0 810 aaKnown RBP18.74■□□□□ 0.59
HPS3-204ENST00000462030 ADA2Q9NZK5 511 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 MID2Q9UJV3 735 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 SHROOM3Q8TF72 1996 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 FAM72CH0Y354 149 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 EEF2KO00418 725 aaKnown RBP18.74■□□□□ 0.59
HPS3-204ENST00000462030 DCLK1O15075 740 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 CABYRO75952 493 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 CSPG5O95196 566 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 FGFR3P22607 806 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 RPS12P25398 132 aaKnown RBP18.74■□□□□ 0.59
HPS3-204ENST00000462030 NMBRP28336 390 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 RPL34P49207 117 aaKnown RBP18.74■□□□□ 0.59
HPS3-204ENST00000462030 CSRP3P50461 194 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 CLCN2P51788 898 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 POU5F1BQ06416 359 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 KYAT1Q16773 422 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 ANO4Q32M45 955 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 SH3D19Q5HYK7 790 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 FAM72AQ5TYM5 149 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 FAM72DQ6L9T8 149 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 FAM72BQ86X60 149 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 NT5DC4Q86YG4 428 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 PCDH20Q8N6Y1 951 aaKnown RBP18.74■□□□□ 0.59
HPS3-204ENST00000462030 CEP70Q8NHQ1 597 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 PCDHAC1Q9H158 963 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 SUDS3Q9H7L9 328 aaPredicted RBP18.74■□□□□ 0.59
HPS3-204ENST00000462030 SETD4Q9NVD3 440 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 DNAAF2Q9NVR5 837 aaKnown RBP18.74■□□□□ 0.59
HPS3-204ENST00000462030 TLK1Q9UKI8 766 aa18.74■□□□□ 0.59
HPS3-204ENST00000462030 GJD2Q9UKL4 321 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms