RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 USP30Q70CQ3 517 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 FAM124AQ86V42 546 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 FAM72BQ86X60 149 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 PSTKQ8IV42 348 aaKnown RBP15.29■□□□□ 0.04
ATG4B-213ENST00000460211 MMAAQ8IVH4 418 aaKnown RBP15.29■□□□□ 0.04
ATG4B-213ENST00000460211 RGL4Q8IZJ4 473 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 STK40Q8N2I9 435 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 OR7D4Q8NG98 312 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 CEP76Q8TAP6 659 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 FRS2Q8WU20 508 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 CCDC42Q96M95 316 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 HSPA12BQ96MM6 686 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 PSMB7Q99436 277 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 OMDQ99983 421 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 GPR174Q9BXC1 333 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 THAP2Q9H0W7 228 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 PCED1AQ9H1Q7 454 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 PABPC3Q9H361 631 aaKnown RBP15.29■□□□□ 0.04
ATG4B-213ENST00000460211 SGK2Q9HBY8 427 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 ABHD10Q9NUJ1 306 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 FBXL12Q9NXK8 326 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 PCSK1NQ9UHG2 260 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 IP6K2Q9UHH9 426 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 DNAI1Q9UI46 699 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 ZZEF1O43149 2961 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 ASPMQ8IZT6 3477 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 CKAP5Q14008 2032 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 CXorf51AA0A1B0GTR3 108 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 MEI4A8MW99 385 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 MYO1FO00160 1098 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 ALOX15BO15296 676 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 FGF10O15520 208 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-213ENST00000460211 IL1BP01584 269 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 CYP1A2P05177 515 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 GNSP15586 552 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 C5AR1P21730 350 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 ITPKAP23677 461 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 MIPP30301 263 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 SLC8A1P32418 973 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 PCK1P35558 622 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 ZNF135P52742 658 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-213ENST00000460211 TPI1P60174 286 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-213ENST00000460211 COL9A2Q14055 689 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-213ENST00000460211 POLD3Q15054 466 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-213ENST00000460211 UAP1L1Q3KQV9 507 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 NLRP14Q86W24 1093 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 ZNF354CQ86Y25 554 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 PYROXD2Q8N2H3 581 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 RTL3Q8N8U3 475 aaKnown RBP15.28■□□□□ 0.04
ATG4B-213ENST00000460211 CTNNBL1Q8WYA6 563 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-213ENST00000460211 FAM129BQ96TA1 746 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 ANP32EQ9BTT0 268 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 NUP85Q9BW27 656 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 NUSAP1Q9BXS6 441 aaKnown RBP15.28■□□□□ 0.04
ATG4B-213ENST00000460211 MAGEB5Q9BZ81 275 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 TRIM7Q9C029 511 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 DHX35Q9H5Z1 703 aaKnown RBP15.28■□□□□ 0.04
ATG4B-213ENST00000460211 CD93Q9NPY3 652 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 ZNF212Q9UDV6 495 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 SUSD2Q9UGT4 822 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 AP4E1Q9UPM8 1137 aa15.28■□□□□ 0.04
ATG4B-213ENST00000460211 FAM208BQ5VWN6 2430 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 SPEGQ15772 3267 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 METTL12A8MUP2 240 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 C1QTNF3-AMACRE9PGA6 284 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 MCF2LO15068 1137 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 MID1O15344 667 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 DAPK3O43293 454 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 BNIP3LO60238 219 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 H2AFZP0C0S5 128 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 SRCP12931 536 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 HOXB3P14651 431 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-213ENST00000460211 PSMD8P48556 350 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 GALCP54803 685 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 ADKP55263 362 aaKnown RBP15.27■□□□□ 0.04
ATG4B-213ENST00000460211 YBEYP58557 167 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-213ENST00000460211 GFPT1Q06210 699 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-213ENST00000460211 DUOXA1Q1HG43 343 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 BOLA3Q53S33 107 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 ARTNQ5T4W7 220 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 LINGO4Q6UY18 593 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 Q6ZVU0 165 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 H2AFVQ71UI9 128 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 ACE2Q9BYF1 805 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-213ENST00000460211 CEP44Q9C0F1 390 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 TMEM9BQ9NQ34 198 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 EVLQ9UI08 416 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-213ENST00000460211 LCMT1Q9UIC8 334 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 ANAPC7Q9UJX3 599 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 PILRBQ9UKJ0 227 aa15.27■□□□□ 0.04
ATG4B-213ENST00000460211 BAHCC1Q9P281 2608 aa15.27■□□□□ 0.03
ATG4B-213ENST00000460211 AKAP13Q12802 2813 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 A0A1W2PP55 124 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 ZSCAN5CA6NGD5 496 aaPredicted RBP15.26■□□□□ 0.03
ATG4B-213ENST00000460211 WASH4PA8MWX3 477 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 EEF2KO00418 725 aaKnown RBP15.26■□□□□ 0.03
ATG4B-213ENST00000460211 LRCH4O75427 683 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 RNASEH2AO75792 299 aaKnown RBP15.26■□□□□ 0.03
ATG4B-213ENST00000460211 SEMA4FO95754 770 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms