RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CYP4X1Q8N118 509 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 MCUQ8NE86 351 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 HCAR2Q8TDS4 363 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 TRIM62Q9BVG3 475 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 MIS12Q9H081 205 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 SMYD2Q9NRG4 433 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 MKS1Q9NXB0 559 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 OR12D3Q9UGF7 316 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 RIMKLBQ9ULI2 386 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 TRBV5-4A0A0C4DH59 114 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 A0A1W2PRU2 124 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 ILVBLA1L0T0 632 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 HMGB1P1B2RPK0 211 aaPredicted RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 C2CD4DB7Z1M9 353 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 PRRT4C9JH25 899 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 MATN3O15232 486 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 ALOX15BO15296 676 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 CCL16O15467 120 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 DRD4P21917 467 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 CDC25CP30307 473 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 ACTN2P35609 894 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 OTUD4Q01804 1114 aaKnown RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 RNASELQ05823 741 aaKnown RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 RALGDSQ12967 914 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 FNBP1LQ5T0N5 605 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 PEAR1Q5VY43 1037 aaPredicted RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 NCEH1Q6PIU2 408 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 IPO4Q8TEX9 1081 aaKnown RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 ATG4AQ8WYN0 398 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 CLDN23Q96B33 292 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 OTUB2Q96DC9 234 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 RBM41Q96IZ5 413 aaKnown RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 TEKT5Q96M29 485 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 FCRL5Q96RD9 977 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 DEF6Q9H4E7 631 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 KIF9Q9HAQ2 790 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 LUC7LQ9NQ29 371 aaKnown RBP5.07□□□□□ -1.6
RIF1-207ENST00000454583 PLAAQ9Y263 795 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 HCN4Q9Y3Q4 1203 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 PTPRBP23467 1997 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 ADAMTS9Q9P2N4 1935 aa5.07□□□□□ -1.6
RIF1-207ENST00000454583 CCDC85CA6NKD9 419 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 KRIT1O00522 736 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 DNALI1O14645 258 aaPredicted RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 HLA-DQB2P05538 268 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 NCAM1P13591 858 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 ITIH2P19823 946 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 AMPD1P23109 780 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 GBP1P32455 592 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 CD70P32970 193 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 ETV4P43268 484 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 STARD6P59095 220 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 INO80DQ53TQ3 878 aaPredicted RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 FAM182AQ5T1J6 154 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 HECTD3Q5T447 861 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 LIN9Q5TKA1 542 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 GRASPQ7Z6J2 395 aaPredicted RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 TMEM135Q86UB9 458 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 EXOC3L1Q86VI1 746 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 FAM131BQ86XD5 332 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 APCDD1Q8J025 514 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 ACTL9Q8TC94 416 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 NXPE3Q969Y0 559 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 FEM1AQ9BSK4 669 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.06□□□□□ -1.6
RIF1-207ENST00000454583 SMG9Q9H0W8 520 aaKnown RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 GBA3Q9H227 469 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 LINC00597Q9H2U6 94 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 SEMA4AQ9H3S1 761 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 PCDH9Q9HC56 1237 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 C11orf16Q9NQ32 467 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 ENAMQ9NRM1 1142 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 VPS45Q9NRW7 570 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 KLHL11Q9NVR0 708 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 NINJ2Q9NZG7 142 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 CDH7Q9ULB5 785 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 LAMA5O15230 3695 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 MYO18AQ92614 2054 aaKnown RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 H7C0S8 307 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 J3KR12 359 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 PRPF4O43172 522 aaKnown RBP eCLIP5.06□□□□□ -1.6
RIF1-207ENST00000454583 ERLIN1O75477 346 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 PRKCHP24723 683 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 CORO1AP31146 461 aaKnown RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 SDC4P31431 198 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 CCR1P32246 355 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 ACVRL1P37023 503 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 CCNFP41002 786 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 KPNA1P52294 538 aaPredicted RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 KRT17Q04695 432 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 IL10RBQ08334 325 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 QPCTQ16769 361 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 DGKKQ5KSL6 1271 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 OR6B2Q6IFH4 312 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 FSTL4Q6MZW2 842 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 TRMT10CQ7L0Y3 403 aaKnown RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 RALGPS2Q86X27 583 aaPredicted RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 ARL14EPQ8N8R7 260 aaPredicted RBP5.06□□□□□ -1.6
RIF1-207ENST00000454583 SH3RF2Q8TEC5 729 aa5.06□□□□□ -1.6
RIF1-207ENST00000454583 PIH1D2Q8WWB5 315 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms