RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 CCDC33Q8N5R6 958 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 TRIM58Q8NG06 486 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 EXD1Q8NHP7 514 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 USP33Q8TEY7 942 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 CELF6Q96J87 481 aaKnown RBP16.04■□□□□ 0.16
VCX3B-204ENST00000453306 XPO6Q96QU8 1125 aaKnown RBP16.04■□□□□ 0.16
VCX3B-204ENST00000453306 ZNF670Q9BS34 389 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 FEM1AQ9BSK4 669 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 EDEM2Q9BV94 578 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 SLC39A8Q9C0K1 460 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 LRRC19Q9H756 370 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 ZDHHC4Q9NPG8 344 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 RXFP3Q9NSD7 469 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 DDX56Q9NY93 547 aaKnown RBP16.04■□□□□ 0.16
VCX3B-204ENST00000453306 RCOR3Q9P2K3 495 aaPredicted RBP16.04■□□□□ 0.16
VCX3B-204ENST00000453306 ACTL7AQ9Y615 435 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 MYOFQ9NZM1 2061 aa16.04■□□□□ 0.16
VCX3B-204ENST00000453306 hCG_1818297A0A087WSY0 165 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 TCRBV7S2A1N4TA0A589 114 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 SNAP91O60641 907 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 ZMPSTE24O75844 475 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 ATP1A1P05023 1023 aaKnown RBP16.03■□□□□ 0.16
VCX3B-204ENST00000453306 PMLP29590 882 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 OR1E1P30953 314 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 HTR7P34969 479 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 ARL4AP40617 200 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 PLK1P53350 603 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 SEC13P55735 322 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 RWDD2BP57060 319 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 SHC2P98077 582 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 GBE1Q04446 702 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 RPS6KA1Q15418 735 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 PREPLQ4J6C6 727 aaPredicted RBP16.03■□□□□ 0.16
VCX3B-204ENST00000453306 C2orf27AQ580R0 203 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 PITRM1Q5JRX3 1037 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 FAM182AQ5T1J6 154 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 N4BP2L1Q5TBK1 243 aaPredicted RBP16.03■□□□□ 0.16
VCX3B-204ENST00000453306 SLC9A4Q6AI14 798 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 NPNTQ6UXI9 565 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 ARHGAP36Q6ZRI8 547 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 PLD5Q8N7P1 536 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 TERB1Q8NA31 727 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 LRRN4Q8WUT4 740 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 ARHGEF2Q92974 986 aaKnown RBP16.03■□□□□ 0.16
VCX3B-204ENST00000453306 HMCESQ96FZ2 354 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 HEMGNQ9BXL5 484 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 SMOC1Q9H4F8 434 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 KIAA1522Q9P206 1035 aaPredicted RBP16.03■□□□□ 0.16
VCX3B-204ENST00000453306 GGA2Q9UJY4 613 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 MMP17Q9ULZ9 603 aa16.03■□□□□ 0.16
VCX3B-204ENST00000453306 ILVBLA1L0T0 632 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 MIF4GDA9UHW6 222 aaKnown RBP16.02■□□□□ 0.16
VCX3B-204ENST00000453306 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.02■□□□□ 0.16
VCX3B-204ENST00000453306 ZNF487B1APH4 448 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 KHNYNO15037 678 aaKnown RBP16.02■□□□□ 0.16
VCX3B-204ENST00000453306 FGF10O15520 208 aaPredicted RBP16.02■□□□□ 0.16
VCX3B-204ENST00000453306 MAP3K6O95382 1288 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 CD160O95971 181 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 APODP05090 189 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 RHOCP08134 193 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 GRIA2P42262 883 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 KIR2DL1P43626 348 aaPredicted RBP16.02■□□□□ 0.16
VCX3B-204ENST00000453306 MAPKAPK2P49137 400 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 ZNF135P52742 658 aaPredicted RBP16.02■□□□□ 0.16
VCX3B-204ENST00000453306 GNG11P61952 73 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 GNA12Q03113 381 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 CDH18Q13634 790 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 PAFAH1B3Q15102 231 aaKnown RBP16.02■□□□□ 0.16
VCX3B-204ENST00000453306 PTPRNQ16849 979 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 PLEKHG6Q3KR16 790 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 ZFYVE27Q5T4F4 411 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 PMS2CLQ68D20 193 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 ANO7Q6IWH7 933 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 SETD3Q86TU7 594 aaPredicted RBP16.02■□□□□ 0.16
VCX3B-204ENST00000453306 RASSF3Q86WH2 238 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 TTC17Q96AE7 1141 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 MRGPRX3Q96LB0 322 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 ACOX2Q99424 681 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 ACE2Q9BYF1 805 aaPredicted RBP16.02■□□□□ 0.16
VCX3B-204ENST00000453306 TPSD1Q9BZJ3 242 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 CATSPERBQ9H7T0 1116 aa16.02■□□□□ 0.16
VCX3B-204ENST00000453306 POLMQ9NP87 494 aaPredicted RBP16.02■□□□□ 0.16
VCX3B-204ENST00000453306 SAE1Q9UBE0 346 aaPredicted RBP16.02■□□□□ 0.16
VCX3B-204ENST00000453306 CHD6Q8TD26 2715 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 TBC1D3BA6NDS4 549 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 GOLGA6L9A6NEM1 432 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 RASA4BC9J798 803 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 DAPK3O43293 454 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 RASA4O43374 803 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 MFSD11O43934 449 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 KIF5CO60282 957 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 KCNK5O95279 499 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 MT-CO1P00395 513 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 PECAM1P16284 738 aaPredicted RBP16.01■□□□□ 0.15
VCX3B-204ENST00000453306 CXCR5P32302 372 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 BYSLQ13895 437 aaKnown RBP16.01■□□□□ 0.15
VCX3B-204ENST00000453306 CRY1Q16526 586 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 KAZNQ674X7 775 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 MBLAC2Q68D91 279 aa16.01■□□□□ 0.15
VCX3B-204ENST00000453306 NYAP1Q6ZVC0 841 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms