RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 RAD54BQ9Y620 910 aa24.57■■□□□ 1.52
CPSF4-207ENST00000451876 PRR33A8MZF0 331 aa24.56■■□□□ 1.52
CPSF4-207ENST00000451876 SRCP12931 536 aa24.56■■□□□ 1.52
CPSF4-207ENST00000451876 CXCR5P32302 372 aa24.56■■□□□ 1.52
CPSF4-207ENST00000451876 GALNT2Q10471 571 aa24.56■■□□□ 1.52
CPSF4-207ENST00000451876 BBS12Q6ZW61 710 aa24.56■■□□□ 1.52
CPSF4-207ENST00000451876 SH2D3CQ8N5H7 860 aa24.56■■□□□ 1.52
CPSF4-207ENST00000451876 HAUS1Q96CS2 278 aa24.56■■□□□ 1.52
CPSF4-207ENST00000451876 GABRG3Q99928 467 aa24.56■■□□□ 1.52
CPSF4-207ENST00000451876 MTG2Q9H4K7 406 aa24.56■■□□□ 1.52
CPSF4-207ENST00000451876 MMP17Q9ULZ9 603 aa24.56■■□□□ 1.52
CPSF4-207ENST00000451876 TTC34A8MYJ7 566 aa24.55■■□□□ 1.52
CPSF4-207ENST00000451876 FANCGO15287 622 aa24.55■■□□□ 1.52
CPSF4-207ENST00000451876 SMAD6O43541 496 aaKnown RBP24.55■■□□□ 1.52
CPSF4-207ENST00000451876 ZFXP17010 805 aaPredicted RBP24.55■■□□□ 1.52
CPSF4-207ENST00000451876 MSNP26038 577 aaKnown RBP24.55■■□□□ 1.52
CPSF4-207ENST00000451876 SERPINH1P50454 418 aaKnown RBP24.55■■□□□ 1.52
CPSF4-207ENST00000451876 RETSATQ6NUM9 610 aa24.55■■□□□ 1.52
CPSF4-207ENST00000451876 TRMT11Q7Z4G4 463 aaKnown RBP24.55■■□□□ 1.52
CPSF4-207ENST00000451876 ATP11CQ8NB49 1132 aa24.55■■□□□ 1.52
CPSF4-207ENST00000451876 PRDM16Q9HAZ2 1276 aa24.55■■□□□ 1.52
CPSF4-207ENST00000451876 IPO11Q9UI26 975 aaKnown RBP24.55■■□□□ 1.52
CPSF4-207ENST00000451876 EFR3BQ9Y2G0 817 aa24.55■■□□□ 1.52
CPSF4-207ENST00000451876 CACNA1IQ9P0X4 2223 aa24.55■■□□□ 1.52
CPSF4-207ENST00000451876 NPC1O15118 1278 aa24.54■■□□□ 1.52
CPSF4-207ENST00000451876 MAFKO60675 156 aa24.54■■□□□ 1.52
CPSF4-207ENST00000451876 PRAMEF11O60813 436 aa24.54■■□□□ 1.52
CPSF4-207ENST00000451876 HOXB2P14652 356 aa24.54■■□□□ 1.52
CPSF4-207ENST00000451876 VAV1P15498 845 aa24.54■■□□□ 1.52
CPSF4-207ENST00000451876 GARSP41250 739 aaKnown RBP24.54■■□□□ 1.52
CPSF4-207ENST00000451876 MAGEA9P43362 315 aa24.54■■□□□ 1.52
CPSF4-207ENST00000451876 ST8SIA6P61647 398 aa24.54■■□□□ 1.52
CPSF4-207ENST00000451876 HSF5Q4G112 596 aaPredicted RBP24.54■■□□□ 1.52
CPSF4-207ENST00000451876 TMEM92Q6UXU6 159 aa24.54■■□□□ 1.52
CPSF4-207ENST00000451876 SPEM1Q8N4L4 309 aa24.54■■□□□ 1.52
CPSF4-207ENST00000451876 ATPAF2Q8N5M1 289 aa24.54■■□□□ 1.52
CPSF4-207ENST00000451876 OLFM3Q96PB7 478 aa24.54■■□□□ 1.52
CPSF4-207ENST00000451876 SP110Q9HB58 689 aa24.54■■□□□ 1.52
CPSF4-207ENST00000451876 TCRBV7S2A1N4TA0A589 114 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 EPHX1P07099 455 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 COL9A1P20849 921 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 TGM2P21980 687 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 AVPR2P30518 371 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 CETN2P41208 172 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 TMEM31Q5JXX7 168 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 SEL1L2Q5TEA6 688 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 KIAA1211LQ6NV74 962 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 SYT13Q7L8C5 426 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 KDM1BQ8NB78 822 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 FCF1Q9Y324 198 aaKnown RBP24.53■■□□□ 1.52
CPSF4-207ENST00000451876 ZNF318Q5VUA4 2279 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 A0A1W2PQF6 199 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 ATP9BO43861 1147 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 ATG13O75143 517 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 VASPP50552 380 aaPredicted RBP24.53■■□□□ 1.52
CPSF4-207ENST00000451876 SATB1Q01826 763 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 KLF1Q13351 362 aaPredicted RBP24.53■■□□□ 1.52
CPSF4-207ENST00000451876 CRY1Q16526 586 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 EOGTQ5NDL2 527 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 FRS2Q8WU20 508 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 C1QTNF1Q9BXJ1 281 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 CD248Q9HCU0 757 aa24.53■■□□□ 1.52
CPSF4-207ENST00000451876 ZSCAN5CA6NGD5 496 aaPredicted RBP24.52■■□□□ 1.52
CPSF4-207ENST00000451876 APOC4-APOC2K7ER74 178 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 PEX11BO96011 259 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 APOC2P02655 101 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 NNMTP40261 264 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 IL10RBQ08334 325 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 DLG2Q15700 870 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 HNRNPA1L2Q32P51 320 aaKnown RBP24.52■■□□□ 1.52
CPSF4-207ENST00000451876 ACCSLQ4AC99 568 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 SDE2Q6IQ49 451 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 B4GALNT4Q76KP1 1039 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 P3H4Q92791 437 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 HDAC11Q96DB2 347 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 LGMNQ99538 433 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 IER2Q9BTL4 223 aa24.52■■□□□ 1.52
CPSF4-207ENST00000451876 SPATA6Q9NWH7 488 aaPredicted RBP24.52■■□□□ 1.52
CPSF4-207ENST00000451876 CXorf51AA0A1B0GTR3 108 aa24.51■■□□□ 1.51
CPSF4-207ENST00000451876 ZNF821O75541 412 aaPredicted RBP24.51■■□□□ 1.51
CPSF4-207ENST00000451876 TJP3O95049 919 aa24.51■■□□□ 1.51
CPSF4-207ENST00000451876 SLC20A2Q08357 652 aa24.51■■□□□ 1.51
CPSF4-207ENST00000451876 E2F5Q15329 346 aa24.51■■□□□ 1.51
CPSF4-207ENST00000451876 C22orf39Q6P5X5 142 aa24.51■■□□□ 1.51
CPSF4-207ENST00000451876 Q6ZVU0 165 aa24.51■■□□□ 1.51
CPSF4-207ENST00000451876 PTPRN2Q92932 1015 aa24.51■■□□□ 1.51
CPSF4-207ENST00000451876 FAM118BQ9BPY3 351 aa24.51■■□□□ 1.51
CPSF4-207ENST00000451876 UBA2Q9UBT2 640 aaPredicted RBP24.51■■□□□ 1.51
CPSF4-207ENST00000451876 TMCC1O94876 653 aa24.5■■□□□ 1.51
CPSF4-207ENST00000451876 MX2P20592 715 aa24.5■■□□□ 1.51
CPSF4-207ENST00000451876 NR2C2P49116 596 aa24.5■■□□□ 1.51
CPSF4-207ENST00000451876 CLCN6P51797 869 aa24.5■■□□□ 1.51
CPSF4-207ENST00000451876 GEMIN4P57678 1058 aaKnown RBP24.5■■□□□ 1.51
CPSF4-207ENST00000451876 CCDC181Q5TID7 509 aa24.5■■□□□ 1.51
CPSF4-207ENST00000451876 ACTL9Q8TC94 416 aa24.5■■□□□ 1.51
CPSF4-207ENST00000451876 ZNF419Q96HQ0 510 aaPredicted RBP24.5■■□□□ 1.51
CPSF4-207ENST00000451876 TNKS2Q9H2K2 1166 aa24.5■■□□□ 1.51
CPSF4-207ENST00000451876 OTUD4Q01804 1114 aaKnown RBP24.5■■□□□ 1.51
CPSF4-207ENST00000451876 PPIDQ08752 370 aaKnown RBP24.5■■□□□ 1.51
CPSF4-207ENST00000451876 SLC10A7Q0GE19 358 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms