RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TBC1D3KA0A087X1G2 549 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 A0A1B0GVT2 93 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 TMEM8BA6NDV4 472 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 TBC1D3FA6NER0 549 aaPredicted RBP16.4■□□□□ 0.22
SGCE-208ENST00000450385 ZSCAN5CA6NGD5 496 aaPredicted RBP16.4■□□□□ 0.22
SGCE-208ENST00000450385 EIF3CLB5ME19 914 aaKnown RBP16.4■□□□□ 0.22
SGCE-208ENST00000450385 TBC1D3LB9A6J9 549 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 SH3BP5O60239 455 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 CBFA2T3O75081 653 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 TBC1D3HP0C7X1 549 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 GZMAP12544 262 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 GPD1P21695 349 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 CD38P28907 300 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 RFC1P35251 1148 aaPredicted RBP16.4■□□□□ 0.22
SGCE-208ENST00000450385 CTSKP43235 329 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 ZNF165P49910 485 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 IRAK1P51617 712 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 ZNF143P52747 638 aaPredicted RBP16.4■□□□□ 0.22
SGCE-208ENST00000450385 C21orf59P57076 290 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 BNC1Q01954 994 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 GNA12Q03113 381 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 KIF19Q2TAC6 998 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 C2CD6Q53TS8 623 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 ARTNQ5T4W7 220 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 MANEALQ5VSG8 457 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 TBC1D3GQ6DHY5 549 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 TBC1D3CQ6IPX1 549 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 ACAD10Q6JQN1 1059 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.4■□□□□ 0.22
SGCE-208ENST00000450385 MON1BQ7L1V2 547 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 IRF2BP2Q7Z5L9 587 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 TBC1D3Q8IZP1 549 aaPredicted RBP16.4■□□□□ 0.22
SGCE-208ENST00000450385 OXR1Q8N573 874 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 PCDH20Q8N6Y1 951 aaKnown RBP16.4■□□□□ 0.22
SGCE-208ENST00000450385 MFSD2AQ8NA29 543 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 OR2A12Q8NGT7 310 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 PPP1R16AQ96I34 528 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 LRIG1Q96JA1 1093 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 PCDHB18PQ96TA0 734 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 EIF3CQ99613 913 aaKnown RBP16.4■□□□□ 0.22
SGCE-208ENST00000450385 NCAPGQ9BPX3 1015 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 DYRK4Q9NR20 520 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 TMEM248Q9NWD8 314 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 AIPL1Q9NZN9 384 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 MPP6Q9NZW5 540 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 SERGEFQ9UGK8 458 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 NEUROG3Q9Y4Z2 214 aa16.4■□□□□ 0.22
SGCE-208ENST00000450385 FAM47DPA6NHR8 397 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 PLEKP08567 350 aaPredicted RBP16.39■□□□□ 0.21
SGCE-208ENST00000450385 L1CAMP32004 1257 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 CHRNA3P32297 505 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 WDR59Q6PJI9 974 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 Q6ZVU0 165 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 SLFN11Q7Z7L1 901 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 EMC1Q8N766 993 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 FAM172AQ8WUF8 416 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 CASKIN2Q8WXE0 1202 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 IQCDQ96DY2 449 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 CNPY3Q9BT09 278 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 HDAC8Q9BY41 377 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 ATP13A1Q9HD20 1204 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 PCOLCE2Q9UKZ9 415 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 PLXNA2O75051 1894 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 TMEM131Q92545 1883 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 CEP295Q9C0D2 2601 aa16.39■□□□□ 0.21
SGCE-208ENST00000450385 CACNA1BQ00975 2339 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 A0A0D9SEW6 157 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 TCRBV5S1A1TA0A578 114 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 ZMPSTE24O75844 475 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 MT-CO1P00395 513 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 CDK4P11802 303 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 ATP1A3P13637 1013 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 VAV1P15498 845 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 TNFAIP3P21580 790 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 GGCXP38435 758 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 GRK6P43250 576 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 SERPINH1P50454 418 aaKnown RBP16.38■□□□□ 0.21
SGCE-208ENST00000450385 CCT8P50990 548 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 HDAC4P56524 1084 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 TPM4P67936 248 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 CDO1Q16878 200 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 C15orf59Q2T9L4 293 aaPredicted RBP16.38■□□□□ 0.21
SGCE-208ENST00000450385 SETMARQ53H47 684 aaPredicted RBP16.38■□□□□ 0.21
SGCE-208ENST00000450385 FIGNQ5HY92 759 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 DNAJC24Q6P3W2 148 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 TFAP2DQ7Z6R9 452 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 NLRP14Q86W24 1093 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 MCOLN2Q8IZK6 566 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 TBC1D31Q96DN5 1066 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 SEPT11Q9NVA2 429 aaKnown RBP16.38■□□□□ 0.21
SGCE-208ENST00000450385 PARVAQ9NVD7 372 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 SARDHQ9UL12 918 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 MSRB2Q9Y3D2 182 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 SNX11Q9Y5W9 270 aa16.38■□□□□ 0.21
SGCE-208ENST00000450385 TP53BP1Q12888 1972 aaPredicted RBP16.38■□□□□ 0.21
SGCE-208ENST00000450385 MAP1BP46821 2468 aaKnown RBP16.37■□□□□ 0.21
SGCE-208ENST00000450385 TRPM6Q9BX84 2022 aa16.37■□□□□ 0.21
SGCE-208ENST00000450385 A0A1B0GTH6 734 aa16.37■□□□□ 0.21
SGCE-208ENST00000450385 PRAMEF26H0Y7S4 382 aa16.37■□□□□ 0.21
SGCE-208ENST00000450385 CBX4O00257 560 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms