RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 WDR5P61964 334 aaKnown RBP16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 BTG3Q14201 252 aaPredicted RBP16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 TRIP4Q15650 581 aaPredicted RBP16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 RAP1GAP2Q684P5 730 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 NAPEPLDQ6IQ20 393 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 OTOP3Q7RTS5 596 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 ZNF683Q8IZ20 524 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 SLC39A11Q8N1S5 342 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 RTL3Q8N8U3 475 aaKnown RBP16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 ACMSDQ8TDX5 336 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 ARMC5Q96C12 935 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 ZNF558Q96NG5 402 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 TRIM55Q9BYV6 548 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 RC3H2Q9HBD1 1191 aaKnown RBP16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 DCTN4Q9UJW0 460 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 ZCWPW2A0A1B0GU75 182 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 TPP1O14773 563 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 TLR5O60602 858 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 TOP3BO95985 862 aaKnown RBP16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 SOD2P04179 222 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 ZDHHC11BP0C7U3 371 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 SLC2A3P11169 496 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 HNRNPH1P31943 449 aaKnown RBP16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 NPY2RP49146 381 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 CDH17Q12864 832 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 ANKRD20A4Q4UJ75 823 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 ALFQ53S48 1182 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 CYB5D1Q6P9G0 228 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 C1orf74Q96LT6 269 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 OXCT2Q9BYC2 517 aaPredicted RBP16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 IL22Q9GZX6 179 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 KLC4Q9NSK0 619 aa16.39■□□□□ 0.21
AP000253.1-201ENST00000449339 FAM237BA0A1B0GVD1 139 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 MAGEB16A2A368 324 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 CFAP73A6NFT4 308 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 MATN3O15232 486 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 CACNG3O60359 315 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 TGDSO95455 350 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 IL1BP01584 269 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 DNAJB2P25686 324 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 GP5P40197 560 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 PSEN1P49768 467 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 PDE1BQ01064 536 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 NRG1Q02297 640 aaPredicted RBP16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 NLRP9Q7RTR0 991 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 TBC1D1Q86TI0 1168 aaPredicted RBP16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 CIR1Q86X95 450 aaPredicted RBP16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 SPATA22Q8NHS9 363 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 RFWD2Q8NHY2 731 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 IGSF8Q969P0 613 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 MFSD3Q96ES6 412 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 MYEOVQ96EZ4 313 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 TMEM169Q96HH4 297 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 CPNE1Q99829 537 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 NOL6Q9H6R4 1146 aaKnown RBP16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 OLA1Q9NTK5 396 aaKnown RBP16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 SIRPGQ9P1W8 387 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 AAR2Q9Y312 384 aaKnown RBP16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 PTPRSQ13332 1948 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 AP3B1O00203 1094 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 UNC5CO95185 931 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 RAG1P15918 1043 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 TPH1P17752 444 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 SKIV2L2P42285 1042 aaKnown RBP16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 NUMBP49757 651 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 PAPOLAP51003 745 aaKnown RBP16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 KCNQ1P51787 676 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 FBXL22Q6P050 247 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 OTOP2Q7RTS6 562 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 LINC00523Q86TU6 105 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 TRIM42Q8IWZ5 723 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 KLHDC8BQ8IXV7 354 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 ATP6V0D2Q8N8Y2 350 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 ATP2A3Q93084 1043 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 KLHL29Q96CT2 875 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 IL12RB2Q99665 862 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 TTLL2Q9BWV7 592 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 UBE2OQ9C0C9 1292 aaKnown RBP16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 CYP4F11Q9HBI6 524 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 CHRAC1Q9NRG0 131 aa16.38■□□□□ 0.21
AP000253.1-201ENST00000449339 A0A0G2JND7 137 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 GJB5O95377 273 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 DSG1Q02413 1049 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 PDE1CQ14123 709 aaPredicted RBP16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 FRG1Q14331 258 aaKnown RBP16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 GRTP1Q5TC63 336 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 AFMIDQ63HM1 303 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 KYAT3Q6YP21 454 aaKnown RBP16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 NUDCD3Q8IVD9 361 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 E2F7Q96AV8 911 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 BTN2A3PQ96KV6 586 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 ZNF512Q96ME7 567 aaPredicted RBP16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 COMMD8Q9NX08 183 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 AFF4Q9UHB7 1163 aaKnown RBP16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 PSMD3O43242 534 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 MT-CYBP00156 380 aaPredicted RBP16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 IGLV3-27P01718 113 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 TUFMP49411 452 aaKnown RBP16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 TMPRSS15P98073 1019 aa16.37■□□□□ 0.21
AP000253.1-201ENST00000449339 BST1Q10588 318 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms