RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 AP3D1O14617 1153 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 KLHL41O60662 606 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 SMNDC1O75940 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 RPL4P36578 427 aaKnown RBP12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 NIPA1Q7RTP0 329 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 DNAAF5Q86Y56 855 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 SGSM3Q96HU1 749 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 WDR24Q96S15 920 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 SLC38A3Q99624 504 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 NCKIPSDQ9NZQ3 722 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 DUSP12Q9UNI6 340 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 PPP1R3GB7ZBB8 358 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 TPD52L2O43399 206 aaKnown RBP12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 SGTAO43765 313 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 ITGAXP20702 1163 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 MTAPQ13126 283 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 SLC29A2Q14542 456 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 TRIP10Q15642 601 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 AGKQ53H12 422 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 ZNF248Q8NDW4 579 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 ACAT2Q9BWD1 397 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 OSBPL2Q9H1P3 480 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 PORCNQ9H237 461 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 ZNF521Q96K83 1311 aa12.92□□□□□ -0.34
AC006001.3-201ENST00000449307 MAGEC1O60732 1142 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 OR6B1O95007 311 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 USP38Q8NB14 1042 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 ZNF862O60290 1169 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 IRX1P78414 480 aaPredicted RBP12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 FKBP1CQ5VVH2 108 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 RBM43Q6ZSC3 357 aaKnown RBP12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 TMEM132CQ8N3T6 1108 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 DEFB119Q8N690 84 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 ARHGAP28Q9P2N2 729 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 NCDNQ9UBB6 729 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 KLQ9UEF7 1012 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 FGF10O15520 208 aaPredicted RBP12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 PCYT1AP49585 367 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 ZNF268Q14587 947 aaPredicted RBP12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 FAM129CQ86XR2 697 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 WRAP53Q9BUR4 548 aaKnown RBP12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 SLITRK2Q9H156 845 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 DNAJC11Q9NVH1 559 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 GJB6O95452 261 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 NR2C2P49116 596 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 SULT2A1Q06520 285 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 GRTP1Q5TC63 336 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 IRGCQ6NXR0 463 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 ADCY4Q8NFM4 1077 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 TSTD1Q8NFU3 115 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 PMEPA1Q969W9 287 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 PACSIN1Q9BY11 444 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 POMKQ9H5K3 350 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 CDHR5Q9HBB8 845 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 MCCC2Q9HCC0 563 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 CPED1A4D0V7 1026 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 ANKRD63C9JTQ0 380 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 CPA3P15088 417 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 CTSOP43234 321 aaPredicted RBP12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 IRF8Q02556 426 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 MGAT5Q09328 741 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 SPANXN3Q5MJ09 141 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 RNFT2Q96EX2 444 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 IL17RBQ9NRM6 502 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 COMMD8Q9NX08 183 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 NRXN1Q9ULB1 1477 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 TM9SF1O15321 606 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 AKAP3O75969 853 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 TRUB2O95900 331 aaKnown RBP12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 OR4Q2P0C623 313 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 IFNGR2P38484 337 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 ACSM2AQ08AH3 577 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 ACSM2BQ68CK6 577 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 C11orf88Q6PI97 169 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 NAT9Q9BTE0 207 aa12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 SPATS2LQ9NUQ6 558 aaKnown RBP12.91□□□□□ -0.34
AC006001.3-201ENST00000449307 IQCMA0A1B0GVH7 501 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 LRRC72A6NJI9 287 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 FFAR2O15552 330 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 PROSCO94903 275 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 PIRTP0C851 137 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 USP4Q13107 963 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 DNAJC3Q13217 504 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 HMGB4Q8WW32 186 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 ANKS1AQ92625 1134 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 PRKD2Q9BZL6 878 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 ZFP14Q9HCL3 533 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 USP15Q9Y4E8 981 aaPredicted RBP12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 SALL1Q9NSC2 1324 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 F8VZ95 297 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 ERAL1O75616 437 aaKnown RBP12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 MAPTP10636 758 aaKnown RBP12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 SOX6P35712 828 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 FAM110CQ1W6H9 321 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 XKR6Q5GH73 641 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 TMC5Q6UXY8 1006 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 TMEM26Q6ZUK4 368 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 ZC3H7AQ8IWR0 971 aaKnown RBP12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 SCLYQ96I15 445 aa12.9□□□□□ -0.34
AC006001.3-201ENST00000449307 TMEM237Q96Q45 408 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms