RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 CCDC173Q0VFZ6 552 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 BYSLQ13895 437 aaKnown RBP13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 DLG2Q15700 870 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 ANKRD20A8PQ5CZ79 823 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 KIAA1211LQ6NV74 962 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 LINGO4Q6UY18 593 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 PEX26Q7Z412 305 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 WDR5BQ86VZ2 330 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 MDGA1Q8NFP4 955 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 OR2T3Q8NH03 318 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 UBE2Q2Q8WVN8 375 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 CASKIN2Q8WXE0 1202 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 PRCCQ92733 491 aaPredicted RBP13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 NELL1Q92832 810 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 HMCESQ96FZ2 354 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 CELF6Q96J87 481 aaKnown RBP13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 LRRC19Q9H756 370 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 PRDM16Q9HAZ2 1276 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 PRSS16Q9NQE7 514 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 AMFRQ9UKV5 643 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 DOCK4Q8N1I0 1966 aa13.36□□□□□ -0.27
ERGIC3-209ENST00000447986 ZNF318Q5VUA4 2279 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 DFFAO00273 331 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ZNF217O75362 1048 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ZMPSTE24O75844 475 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ZRANB2O95218 330 aaKnown RBP eCLIP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ACADMP11310 421 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 GABRG2P18507 467 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 GLDCP23378 1020 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 IL4RP24394 825 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 CETN2P41208 172 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ARF5P84085 180 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 MMRN1Q13201 1228 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 SERINC3Q13530 473 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ELAVL3Q14576 367 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 USP39Q53GS9 565 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ZNF662Q6ZS27 426 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 DSG4Q86SJ6 1040 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 TMPRSS6Q8IU80 811 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ZBTB44Q8NCP5 570 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 RAPGEF5Q92565 580 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 FAF2Q96CS3 445 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 RBM41Q96IZ5 413 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 SPACA7Q96KW9 195 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ALS2CR12Q96Q35 445 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 CEP44Q9C0F1 390 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 SLC39A8Q9C0K1 460 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 NOL6Q9H6R4 1146 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 SP110Q9HB58 689 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 TRIM10Q9UDY6 481 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 GRID2IPA4D2P6 1211 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 MIF4GDA9UHW6 222 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 SIN3BO75182 1162 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 PALMO75781 387 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ZFXP17010 805 aaPredicted RBP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 NDUFV2P19404 249 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 CTNNA1P35221 906 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 PAPOLAP51003 745 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ZBTB16Q05516 673 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 SFSWAPQ12872 951 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ZNF776Q68DI1 518 aaPredicted RBP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 C22orf39Q6P5X5 142 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 KIAA1324Q6UXG2 1013 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 LRRC49Q8IUZ0 686 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 CCDC50Q8IVM0 306 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 KATNAL2Q8IYT4 538 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 RCOR2Q8IZ40 523 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 NPWQ8N729 165 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 UBL4BQ8N7F7 174 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 PCDH19Q8TAB3 1148 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 FRS2Q8WU20 508 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 OR8D1Q8WZ84 308 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 PTPRN2Q92932 1015 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ERLEC1Q96DZ1 483 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 SIPA1Q96FS4 1042 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 MRGPRX1Q96LB2 322 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ZNF830Q96NB3 372 aaPredicted RBP13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 RNF157Q96PX1 679 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 TPSD1Q9BZJ3 242 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 CD248Q9HCU0 757 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 LZTFL1Q9NQ48 299 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 PCDHA3Q9Y5H8 950 aa13.35□□□□□ -0.27
ERGIC3-209ENST00000447986 ATG2BQ96BY7 2078 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 APOL1O14791 398 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 ALOX15BO15296 676 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 ZSCAN12O43309 604 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 BNIP3LO60238 219 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 MT-CO1P00395 513 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 DNTTP04053 509 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 COPAP53621 1224 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 RWDD2BP57060 319 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 DMWDQ09019 674 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 PAFAH1B3Q15102 231 aaKnown RBP13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 TTC31Q49AM3 519 aaPredicted RBP13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 INO80DQ53TQ3 878 aaPredicted RBP13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 C9orf64Q5T6V5 341 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 AFMIDQ63HM1 303 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 Q6ZVU0 165 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 C11orf74Q86VG3 221 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 RFX6Q8HWS3 928 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms