RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	12.77	□□□□□ -0.37	2e-8	■■□□□ 13.3
DDR1-238	ENST00000446312	ARNTL2	Q8WYA1	636 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	CERS2	Q96G23	380 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	OSMR	Q99650	979 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	GPR20	Q99678	358 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	NXF3	Q9H4D5	531 aa	Known RBP	12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	PPCS	Q9HAB8	311 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	GBA2	Q9HCG7	927 aa	Predicted RBP	12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	INIP	Q9NRY2	104 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	FAF1	Q9UNN5	650 aa	Predicted RBP	12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	SPO11	Q9Y5K1	396 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	SCN1A	P35498	2009 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	NRP1	O14786	923 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	AURKA	O14965	403 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	ZBTB24	O43167	697 aa	Predicted RBP	12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	PMPCB	O75439	489 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	HPCA	P84074	193 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	KLHDC10	Q6PID8	442 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	UTS2B	Q765I0	119 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	TRIML2	Q8N7C3	387 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	AFG1L	Q8WV93	481 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	HSPBAP1	Q96EW2	488 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	RNF39	Q9H2S5	420 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	PDZD7	Q9H5P4	517 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	HOXC10	Q9NYD6	342 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	CPA4	Q9UI42	421 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	PRELID1	Q9Y255	219 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312		F8W8V4	182 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312		H3BNX3	289 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	DFFA	O00273	331 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	PIGR	P01833	764 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	CDH5	P33151	784 aa	Predicted RBP	12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	ARPC4	P59998	168 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	CYLC2	Q14093	348 aa	Predicted RBP	12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	MXD4	Q14582	209 aa	Predicted RBP	12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	R3HDM1	Q15032	1099 aa	Known RBP	12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	IL23R	Q5VWK5	629 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	METTL7B	Q6UX53	244 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	PQLC1	Q8N2U9	271 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	LRTOMT	Q8WZ04	291 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	CASP10	Q92851	521 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	AS3MT	Q9HBK9	375 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	MRGBP	Q9NV56	204 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	MTMR10	Q9NXD2	777 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	TLK1	Q9UKI8	766 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	N6AMT1	Q9Y5N5	214 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	PTGDR2	Q9Y5Y4	395 aa		12.76	□□□□□ -0.37
DDR1-238	ENST00000446312	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.76	□□□□□ -0.37	3e-6	■■■■■ 137.9
DDR1-238	ENST00000446312	FKBP6	O75344	327 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	MX2	P20592	715 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	VARS	P26640	1264 aa	Known RBP	12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	PTPN7	P35236	360 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	MAP3K7CL	P57077	242 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	PRPSAP1	Q14558	356 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	ANKRD20A4	Q4UJ75	823 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	SH3D19	Q5HYK7	790 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	ACAD11	Q709F0	780 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	ZFP28	Q8NHY6	868 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	KLHL32	Q96NJ5	620 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	NIFK	Q9BYG3	293 aa	Known RBP	12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	ZNF408	Q9H9D4	720 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	NMRAL1	Q9HBL8	299 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	SETD4	Q9NVD3	440 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	TUBA8	Q9NY65	449 aa	Predicted RBP	12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	EGFL7	Q9UHF1	273 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	GJD2	Q9UKL4	321 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	PLOD2	O00469	737 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	SPAG6	O75602	509 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	VAPB	O95292	243 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	MOCS2	O96007	188 aa	Predicted RBP	12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	POLB	P06746	335 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	NAT2	P11245	290 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	AOC1	P19801	751 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	TKT	P29401	623 aa	Known RBP	12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	RBP5	P82980	135 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	PLA2G4E	Q3MJ16	856 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	FAAH2	Q6GMR7	532 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	ARHGAP36	Q6ZRI8	547 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	HASPIN	Q8TF76	798 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	WDR41	Q9HAD4	459 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	FBRSL1	Q9HCM7	1045 aa	Known RBP	12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	SLC2A6	Q9UGQ3	507 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	VANGL2	Q9ULK5	521 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	DOLK	Q9UPQ8	538 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	TMED5	Q9Y3A6	229 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312		A0A0A0MRY4	1105 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	B4GALT4	O60513	344 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	TSPAN3	O60637	253 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	CYP2C8	P10632	490 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	NR4A1	P22736	598 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	NEK2	P51955	445 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	CDH13	P55290	713 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	TMEM259	Q4ZIN3	620 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	CLEC6A	Q6EIG7	209 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	LRRC8E	Q6NSJ5	796 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	SLC2A7	Q6PXP3	512 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	BNC2	Q6ZN30	1099 aa	Predicted RBP	12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	CATSPER4	Q7RTX7	472 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	URGCP	Q8TCY9	931 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	FNIP1	Q8TF40	1166 aa		12.75	□□□□□ -0.37

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