RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	STAR	P49675	285 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	AFF1	P51825	1210 aa	Known RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	CAPZA1	P52907	286 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	JAM2	P57087	298 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	FOXO4	P98177	505 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	CTBS	Q01459	385 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	STRN3	Q13033	797 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	PEX6	Q13608	980 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	GALE	Q14376	348 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	GALNT3	Q14435	633 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	NFIX	Q14938	502 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	CLCA4	Q14CN2	919 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	EXOC3L4	Q17RC7	722 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	ZFP69	Q49AA0	526 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	MINDY4	Q4G0A6	757 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	KIAA1755	Q5JYT7	1200 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	FOXR2	Q6PJQ5	311 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	VSTM1	Q6UX27	236 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	PLEKHG7	Q6ZR37	379 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	SLC22A16	Q86VW1	577 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	TPCN2	Q8NHX9	752 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	URGCP	Q8TCY9	931 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	MCOLN3	Q8TDD5	553 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	SLC26A7	Q8TE54	656 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	RNF139	Q8WU17	664 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	C10orf82	Q8WW14	230 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	SHC3	Q92529	594 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	HTRA1	Q92743	480 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	GTF2H4	Q92759	462 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	PTCD3	Q96EY7	689 aa	Known RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	DCUN1D1	Q96GG9	259 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	MSANTD3	Q96H12	275 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	CRAMP1	Q96RY5	1269 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	DNAJC7	Q99615	494 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	TOR3A	Q9H497	397 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	RPF2	Q9H7B2	306 aa	Known RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	ENAM	Q9NRM1	1142 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	NKIRAS1	Q9NYS0	192 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	GLTP	Q9NZD2	209 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	PGAP2	Q9UHJ9	254 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	TRMT6	Q9UJA5	497 aa	Known RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	AGO1	Q9UL18	857 aa	Known RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	INPP5F	Q9Y2H2	1132 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	MED16	Q9Y2X0	877 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	TMX2	Q9Y320	296 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	TESMIN	Q9Y4I5	508 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	COL24A1	Q17RW2	1714 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	DDX60	Q8IY21	1712 aa	Known RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	OR6C74	A6NCV1	312 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329		C9IYK1	514 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329		H3BMQ9	156 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	PCDH17	O14917	1159 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	TREH	O43280	583 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	DAB1	O75553	588 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	RB1	P06400	928 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	FOXN2	P32314	431 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	NDST2	P52849	883 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	CASP9	P55211	416 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	IRX4	P78413	519 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	ZNF200	P98182	395 aa	Predicted RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	CHRND	Q07001	517 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	AUH	Q13825	339 aa	Known RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	LRRC41	Q15345	812 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	TTF1	Q15361	905 aa	Predicted RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	HES5	Q5TA89	166 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	KLHDC7A	Q5VTJ3	777 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	CDKAL1	Q5VV42	579 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	DRICH1	Q6PGQ1	229 aa	Predicted RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	TMEM65	Q6PI78	240 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	KIAA1324	Q6UXG2	1013 aa	Known RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	GPBP1	Q86WP2	473 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	CNTROB	Q8N137	903 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	TRPV3	Q8NET8	790 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	WDR48	Q8TAF3	677 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	DDX1	Q92499	740 aa	Known RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	SNAPC3	Q92966	411 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	C1orf50	Q9BV19	199 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	COG4	Q9H9E3	785 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	HOMER2	Q9NSB8	354 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	FAM207A	Q9NSI2	230 aa	Predicted RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	TRMT112	Q9UI30	125 aa	Known RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	RPS6KA6	Q9UK32	745 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	CNOT11	Q9UKZ1	510 aa	Known RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	COPS3	Q9UNS2	423 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	KLF2	Q9Y5W3	355 aa	Predicted RBP	6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	KCNE2	Q9Y6J6	123 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	ZHX2	Q9Y6X8	837 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	PMF1-BGLAP	U3KQ54	211 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	CASZ1	Q86V15	1759 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	MYH6	P13533	1939 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	MYH4	Q9Y623	1939 aa		6.91	□□□□□ -1.3
TRIM6-205	ENST00000445329	LEUTX	A8MZ59	168 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329		I3L521	148 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	KIAA0391	O15091	583 aa	Known RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	PIP5K1C	O60331	668 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	TCEA3	O75764	348 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	PCCA	P05165	728 aa	Predicted RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	POLR2M	P0CAP2	368 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	TNNI1	P19237	187 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	KCNA5	P22460	613 aa		6.9	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms