RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 WDR11Q9BZH6 1224 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 FTOQ9C0B1 505 aaKnown RBP eCLIP4.05□□□□□ -1.76
UBR3-206ENST00000444475 IPPKQ9H8X2 491 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 SYTL2Q9HCH5 934 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 DPP7Q9UHL4 492 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 GPR55Q9Y2T6 319 aaPredicted RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 ADAM18Q9Y3Q7 739 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 SPACA6W5XKT8 324 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 PRSS38A1L453 326 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 OR2W5A6NFC9 320 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 IQCF5A8MTL0 148 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 E9PI62 339 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 ADAMDEC1O15204 470 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 KLK10O43240 276 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 MED7O43513 233 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 NTSR2O95665 410 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 LPLP06858 475 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 PECAM1P16284 738 aaPredicted RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 CHRNA3P32297 505 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 NTF4P34130 210 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 MCAMP43121 646 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 JAM2P57087 298 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 PPP3CAQ08209 521 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 TUSC3Q13454 348 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 STIM1Q13586 685 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 TOB2Q14106 344 aaPredicted RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 MAPRE2Q15555 327 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 KCNA10Q16322 511 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 SGCBQ16585 318 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 KIZQ2M2Z5 673 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 CST9LP1Q5W188 147 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 BEND4Q6ZU67 534 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 NUDT13Q86X67 352 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 MIB1Q86YT6 1006 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 CCDC117Q8IWD4 279 aaPredicted RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 PALM2Q8IXS6 379 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 SLC43A2Q8N370 569 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 AGBL3Q8NEM8 1001 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 DPF2Q92785 391 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 DVL3Q92997 716 aaPredicted RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 SNX27Q96L92 541 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 MRGPRX4Q96LA9 322 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 PKP2Q99959 881 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 MTG1Q9BT17 334 aaPredicted RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 IKZF4Q9H2S9 585 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 PNPLA3Q9NST1 481 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 TBC1D23Q9NUY8 699 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 TUBA8Q9NY65 449 aaPredicted RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 MTMR6Q9Y217 621 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 ATP6V1DQ9Y5K8 247 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 PMF1-BGLAPU3KQ54 211 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 MAGI3Q5TCQ9 1506 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 FAM230AA0A1W2PPH8 454 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 TCRBV21S2A2A0A5A6 115 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 SLC16A3O15427 465 aaKnown RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 DNPH1O43598 174 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 SPRY1O43609 319 aaPredicted RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 AK1P00568 194 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 APEHP13798 732 aaKnown RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 GUCY1A2P33402 732 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 PCGF2P35227 344 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 DGKEP52429 567 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 SMSP52788 366 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 RTP1P59025 263 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 POLR2GP62487 172 aaKnown RBP eCLIP4.04□□□□□ -1.76
UBR3-206ENST00000444475 IRF9Q00978 393 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 ADRM1Q16186 407 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 PRAMEF20Q5VT98 475 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 RAP1GAP2Q684P5 730 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 ETFRF1Q6IPR1 90 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 TMC5Q6UXY8 1006 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 RRAGAQ7L523 313 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 HDXQ7Z353 690 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 ZZZ3Q8IYH5 903 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 KDM8Q8N371 416 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 GRAPLQ8TC17 118 aaPredicted RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 ACTRT2Q8TDY3 377 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 OR1E3Q8WZA6 343 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 GATA6Q92908 595 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 SLAMF9Q96A28 289 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 ELP4Q96EB1 424 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 INTS4Q96HW7 963 aaKnown RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 IFT74Q96LB3 600 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 TRERF1Q96PN7 1200 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 ANO3Q9BYT9 981 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.04□□□□□ -1.76
UBR3-206ENST00000444475 BARHL2Q9NY43 387 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 ANKMY1Q9P2S6 941 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 STX8Q9UNK0 236 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 STRCQ7RTU9 1775 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 SENP3-EIF4A1A0A087X0R7 540 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 C5orf51A6NDU8 294 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 SPDYE3A6NKU9 549 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 OR6C75A6NL08 312 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 LRRC53A6NM62 1247 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 PAPSS1O43252 624 aaPredicted RBP4.04□□□□□ -1.76
UBR3-206ENST00000444475 KRT86O43790 486 aa4.04□□□□□ -1.76
UBR3-206ENST00000444475 RBBP9O75884 186 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms