RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 DEFB103AP81534 67 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 SLC1A5Q15758 541 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 SLC14A2Q15849 920 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 LRRC26Q2I0M4 334 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 GRTP1Q5TC63 336 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 TMCO4Q5TGY1 634 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 FYB2Q5VWT5 728 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 PDPK2PQ6A1A2 396 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 POTEHQ6S545 545 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 ITIH5Q86UX2 942 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 IPMKQ8NFU5 416 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 RAB3IL1Q8TBN0 382 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 ATP2A3Q93084 1043 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 VWCEQ96DN2 955 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 SRPK1Q96SB4 655 aaKnown RBP13.41□□□□□ -0.26
CPSF4-206ENST00000441580 FICDQ9BVA6 458 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 PRKD2Q9BZL6 878 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 NOL6Q9H6R4 1146 aaKnown RBP13.41□□□□□ -0.26
CPSF4-206ENST00000441580 ACTR5Q9H9F9 607 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-206ENST00000441580 CYP4F11Q9HBI6 524 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 NDFIP2Q9NV92 336 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 RBM22Q9NW64 420 aaKnown RBP eCLIP13.41□□□□□ -0.264e-6■■■□□ 14.6
CPSF4-206ENST00000441580 ZNF212Q9UDV6 495 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 STARD13Q9Y3M8 1113 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 HTTP42858 3142 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 GOLGA8RI6L899 631 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 C2CD2LO14523 706 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 PRRG1O14668 218 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 TIMM44O43615 452 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 GLRA3O75311 464 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 USP12O75317 370 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 PIAS1O75925 651 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 TBX18O95935 607 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 PYGBP11216 843 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 RAG1P15918 1043 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 HMGA1P17096 107 aaKnown RBP13.4□□□□□ -0.26
CPSF4-206ENST00000441580 PAMP19021 973 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 ELF1P32519 619 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 SERPINB8P50452 374 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 CDH4P55283 916 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 CORO7P57737 925 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 BMPR2Q13873 1038 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 ANKRD20A4Q4UJ75 823 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 ALFQ53S48 1182 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 PCID2Q5JVF3 399 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 FAM182AQ5T1J6 154 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 MARC1Q5VT66 337 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 NADSYN1Q6IA69 706 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 SH2D5Q6ZV89 423 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 CHST9Q7L1S5 443 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 NECAB2Q7Z6G3 386 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 KCNMB4Q86W47 210 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 TCEAL8Q8IYN2 117 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 BBS5Q8N3I7 341 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 TEX26Q8N6G2 289 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 OTUD6BQ8N6M0 293 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 GABPB2Q8TAK5 448 aaPredicted RBP13.4□□□□□ -0.26
CPSF4-206ENST00000441580 ISL2Q96A47 359 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 YME1L1Q96TA2 773 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 ELAC2Q9BQ52 826 aaKnown RBP13.4□□□□□ -0.26
CPSF4-206ENST00000441580 TRIM56Q9BRZ2 755 aaKnown RBP13.4□□□□□ -0.26
CPSF4-206ENST00000441580 KIFC1Q9BW19 673 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 MRPL17Q9NRX2 175 aaKnown RBP13.4□□□□□ -0.26
CPSF4-206ENST00000441580 PCMTD2Q9NV79 361 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 ARL2BPQ9Y2Y0 163 aa13.4□□□□□ -0.26
CPSF4-206ENST00000441580 PTPRSQ13332 1948 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 ZCWPW2A0A1B0GU75 182 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 COCHO43405 550 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 ATP9BO43861 1147 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 EDF1O60869 148 aaKnown RBP13.39□□□□□ -0.27
CPSF4-206ENST00000441580 RFPL1O75677 317 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 CNTN5O94779 1100 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 SEC24AO95486 1093 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 IL1BP01584 269 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 ITGA2BP08514 1039 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 CSF2RAP15509 400 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 FOXN2P32314 431 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 CRHR1P34998 444 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 SPRP35270 261 aaPredicted RBP13.39□□□□□ -0.27
CPSF4-206ENST00000441580 ADRA1AP35348 466 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 ETFBP38117 255 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 HADHAP40939 763 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 ETV4P43268 484 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 LIMK2P53671 638 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 EPHB3P54753 998 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 IFT88Q13099 833 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 SERINC3Q13530 473 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 POLD3Q15054 466 aaPredicted RBP13.39□□□□□ -0.27
CPSF4-206ENST00000441580 UGP2Q16851 508 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 STXBP5Q5T5C0 1151 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 KYAT3Q6YP21 454 aaKnown RBP13.39□□□□□ -0.27
CPSF4-206ENST00000441580 OTOP3Q7RTS5 596 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 ZNF354CQ86Y25 554 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 LGI2Q8N0V4 545 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 GBP7Q8N8V2 638 aaPredicted RBP13.39□□□□□ -0.27
CPSF4-206ENST00000441580 IGSF8Q969P0 613 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 IMP4Q96G21 291 aaKnown RBP13.39□□□□□ -0.27
CPSF4-206ENST00000441580 PAWRQ96IZ0 340 aaKnown RBP13.39□□□□□ -0.27
CPSF4-206ENST00000441580 FAM111AQ96PZ2 611 aa13.39□□□□□ -0.27
CPSF4-206ENST00000441580 KLF6Q99612 283 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms