RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 GOT1P17174 413 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 EPHB2P29323 1055 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 L1CAMP32004 1257 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 MAPKAPK2P49137 400 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 GALCP54803 685 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 ARF5P84085 180 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 ZNF252P-AS1Q0IIN9 211 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 PPM1JQ5JR12 505 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 DAB2IPQ5VWQ8 1189 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 KIAA0895LQ68EN5 471 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 RETSATQ6NUM9 610 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 NCEH1Q6PIU2 408 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.05□□□□□ -0.16
LTBR-202ENST00000440421 VPS36Q86VN1 386 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 OR14C36Q8NHC7 312 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 ARHGEF2Q92974 986 aaKnown RBP14.05□□□□□ -0.16
LTBR-202ENST00000440421 TRIM11Q96F44 468 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 ISCUQ9H1K1 167 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 PCSK1NQ9UHG2 260 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 SARDHQ9UL12 918 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 FZD4Q9ULV1 537 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.05□□□□□ -0.16
LTBR-202ENST00000440421 SLCO1B1Q9Y6L6 691 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 DCHS1Q96JQ0 3298 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 PI4KAP42356 2102 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 PCDH15Q96QU1 1955 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 A0A087X0T9 212 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 C1QTNF3-AMACRE9PGA6 284 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 ARHGAP33O14559 1287 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 MCF2LO15068 1137 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 BCAT2O15382 392 aaPredicted RBP14.04□□□□□ -0.16
LTBR-202ENST00000440421 CBFA2T2O43439 604 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 ZMPSTE24O75844 475 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 RNF8O76064 485 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 SYPP08247 313 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 FAM228BP0C875 321 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 MYBL1P10243 752 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 DRD3P35462 400 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 DNA2P51530 1060 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 C22orf39Q6P5X5 142 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 LEKR1Q6ZMV7 388 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 ZNF354CQ86Y25 554 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 MINDY1Q8N5J2 469 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 ARFGAP1Q8N6T3 406 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 OR2A12Q8NGT7 310 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 PIP4K2CQ8TBX8 421 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 CCDC114Q96M63 670 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 EPAS1Q99814 870 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 ACE2Q9BYF1 805 aaPredicted RBP14.04□□□□□ -0.16
LTBR-202ENST00000440421 PPM1HQ9ULR3 514 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 AP4E1Q9UPM8 1137 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 FCF1Q9Y324 198 aaKnown RBP14.04□□□□□ -0.16
LTBR-202ENST00000440421 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
LTBR-202ENST00000440421 SCINQ9Y6U3 715 aa14.04□□□□□ -0.16
LTBR-202ENST00000440421 LRRC72A6NJI9 287 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 ALOX15BO15296 676 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 RAMP2O60895 175 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 IGHV4-34P06331 123 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 CTSLP07711 333 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 CHRNA3P32297 505 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 ETFBP38117 255 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 RECQLP46063 649 aaPredicted RBP14.03□□□□□ -0.16
LTBR-202ENST00000440421 SERPINH1P50454 418 aaKnown RBP14.03□□□□□ -0.16
LTBR-202ENST00000440421 CLCN6P51797 869 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 ADPRHP54922 357 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 AIF1P55008 147 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 TPI1P60174 286 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 FOXK2Q01167 660 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 CNTN1Q12860 1018 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 GRIK2Q13002 908 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 POLD3Q15054 466 aaPredicted RBP14.03□□□□□ -0.16
LTBR-202ENST00000440421 CA9Q16790 459 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 FAM46CQ5VWP2 391 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 RTL3Q8N8U3 475 aaKnown RBP14.03□□□□□ -0.16
LTBR-202ENST00000440421 CHST14Q8NCH0 376 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 OR2T34Q8NGX1 318 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 GRIN3AQ8TCU5 1115 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 PEBP4Q96S96 227 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 THAP2Q9H0W7 228 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 MAGEH1Q9H213 219 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 DHX35Q9H5Z1 703 aaKnown RBP14.03□□□□□ -0.16
LTBR-202ENST00000440421 RETREG1Q9H6L5 497 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 MRPL47Q9HD33 250 aaKnown RBP14.03□□□□□ -0.16
LTBR-202ENST00000440421 ARHGAP20Q9P2F6 1191 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 HPCAL4Q9UM19 191 aa14.03□□□□□ -0.16
LTBR-202ENST00000440421 TBC1D3DA0A087WVF3 549 aa14.02□□□□□ -0.17
LTBR-202ENST00000440421 TBC1D3IA0A087WXS9 549 aa14.02□□□□□ -0.17
LTBR-202ENST00000440421 TBC1D3EA0A087X179 549 aa14.02□□□□□ -0.17
LTBR-202ENST00000440421 TBC1D3KA0A087X1G2 549 aa14.02□□□□□ -0.17
LTBR-202ENST00000440421 A0A1B0GVT2 93 aa14.02□□□□□ -0.17
LTBR-202ENST00000440421 TBC1D3FA6NER0 549 aaPredicted RBP14.02□□□□□ -0.17
LTBR-202ENST00000440421 TBC1D3LB9A6J9 549 aa14.02□□□□□ -0.17
LTBR-202ENST00000440421 RNF103O00237 685 aa14.02□□□□□ -0.17
LTBR-202ENST00000440421 KPNA3O00505 521 aaPredicted RBP14.02□□□□□ -0.17
LTBR-202ENST00000440421 PRPSAP2O60256 369 aa14.02□□□□□ -0.17
LTBR-202ENST00000440421 CD160O95971 181 aa14.02□□□□□ -0.17
LTBR-202ENST00000440421 TBC1D3HP0C7X1 549 aa14.02□□□□□ -0.17
LTBR-202ENST00000440421 CD27P26842 260 aa14.02□□□□□ -0.17
LTBR-202ENST00000440421 MIPP30301 263 aa14.02□□□□□ -0.17
LTBR-202ENST00000440421 CSNK1EP49674 416 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms