RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 ZNF333Q96JL9 665 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 APOL2Q9BQE5 337 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 SLC25A51Q9H1U9 297 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 C12orf65Q9H3J6 166 aaKnown RBP11.99□□□□□ -0.49
SMAD3-202ENST00000439724 RETREG1Q9H6L5 497 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 MANSC1Q9H8J5 431 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 SLCO1B3Q9NPD5 702 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 ENTPD7Q9NQZ7 604 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 UBP1Q9NZI7 540 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 SLC17A6Q9P2U8 582 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 DNMT3LQ9UJW3 386 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 MAGED2Q9UNF1 606 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-202ENST00000439724 PSAT1Q9Y617 370 aa11.99□□□□□ -0.49
SMAD3-202ENST00000439724 KLF11O14901 512 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 NEBLO76041 1014 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 SEC24AO95486 1093 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 MT-CYBP00156 380 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-202ENST00000439724 GSTA1P08263 222 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 HMBSP08397 361 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 ITGA2BP08514 1039 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 ERVK-10P10266 1014 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 HMGA1P17096 107 aaKnown RBP11.98□□□□□ -0.49
SMAD3-202ENST00000439724 TACR2P21452 398 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 ATP5C1P36542 298 aaKnown RBP11.98□□□□□ -0.49
SMAD3-202ENST00000439724 RENBPP51606 427 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 PARP15Q460N3 678 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 PCID2Q5JVF3 399 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 STXBP5Q5T5C0 1151 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 TRIM42Q8IWZ5 723 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 CMTR2Q8IYT2 770 aaKnown RBP11.98□□□□□ -0.49
SMAD3-202ENST00000439724 ANKLE1Q8NAG6 615 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 IPMKQ8NFU5 416 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 PTCD2Q8WV60 388 aaKnown RBP11.98□□□□□ -0.49
SMAD3-202ENST00000439724 ISL2Q96A47 359 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 TRMT2BQ96GJ1 504 aaKnown RBP11.98□□□□□ -0.49
SMAD3-202ENST00000439724 TMEM169Q96HH4 297 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 MYRFLQ96LU7 910 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 RPRD1AQ96P16 312 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-202ENST00000439724 RBBP8Q99708 897 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 FICDQ9BVA6 458 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 SP110Q9HB58 689 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 MRM3Q9HC36 420 aaKnown RBP11.98□□□□□ -0.49
SMAD3-202ENST00000439724 PCMTD2Q9NV79 361 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 HAUS2Q9NVX0 235 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 KLHL14Q9P2G3 628 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 TXNDC16Q9P2K2 825 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 DNAH12Q6ZR08 3092 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 MYLKQ15746 1914 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 CHD5Q8TDI0 1954 aa11.98□□□□□ -0.49
SMAD3-202ENST00000439724 WDR91A4D1P6 747 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 ZNF840PA6NDX5 716 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 F5H5T6 163 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 ACSL4O60488 711 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 RAMP2O60895 175 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 EFCAB14O75071 495 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 GLRA3O75311 464 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 ALDOAP04075 364 aaKnown RBP11.97□□□□□ -0.49
SMAD3-202ENST00000439724 TPH1P17752 444 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 LAG3P18627 525 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 MAGEA12P43365 314 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 KCNQ1P51787 676 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 LIMK2P53671 638 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 CSE1LP55060 971 aaKnown RBP11.97□□□□□ -0.49
SMAD3-202ENST00000439724 ACTN3Q08043 901 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-202ENST00000439724 IL10RBQ08334 325 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 SF3A3Q12874 501 aaKnown RBP eCLIP11.97□□□□□ -0.491e-10■■■■■ 34.8
SMAD3-202ENST00000439724 DBN1Q16643 649 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 SPRED3Q2MJR0 410 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 HECTD3Q5T447 861 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 TEDDM1Q5T9Z0 273 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 DENND5AQ6IQ26 1287 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 PKN3Q6P5Z2 889 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 POTEHQ6S545 545 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 KDELC1Q6UW63 502 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 KYAT3Q6YP21 454 aaKnown RBP11.97□□□□□ -0.49
SMAD3-202ENST00000439724 OTOAQ7RTW8 1153 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 KCNMB4Q86W47 210 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 NDUFAF2Q8N183 169 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 TEX26Q8N6G2 289 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 GBP7Q8N8V2 638 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-202ENST00000439724 CCDC63Q8NA47 563 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 ZNF398Q8TD17 642 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 AZIN2Q96A70 460 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 PLD4Q96BZ4 506 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 MFSD3Q96ES6 412 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 IMP4Q96G21 291 aaKnown RBP11.97□□□□□ -0.49
SMAD3-202ENST00000439724 MRGPRX2Q96LB1 330 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 ZNF512Q96ME7 567 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-202ENST00000439724 VPS45Q9NRW7 570 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 ABCF3Q9NUQ8 709 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 NSMCE4AQ9NXX6 385 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 YIPF1Q9Y548 306 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 MRPL42Q9Y6G3 142 aaKnown RBP11.97□□□□□ -0.49
SMAD3-202ENST00000439724 MIA3Q5JRA6 1907 aa11.97□□□□□ -0.49
SMAD3-202ENST00000439724 J3KR12 359 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 C2CD2LO14523 706 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 TPP1O14773 563 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 BIRC5O15392 142 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 NMBRP28336 390 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 SPRP35270 261 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms