RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 PRNPP04156 253 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 MAOBP27338 520 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 HNRNPH3P31942 346 aaKnown RBP10.7□□□□□ -0.7
MCF2L-216ENST00000439475 TPI1P60174 286 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 OGDHQ02218 1023 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 TEAD4Q15561 434 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 BOLA3Q53S33 107 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 TCEAL6Q6IPX3 200 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.7□□□□□ -0.7
MCF2L-216ENST00000439475 NLRP14Q86W24 1093 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 VSTM4Q8IW00 320 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 PCDH20Q8N6Y1 951 aaKnown RBP10.7□□□□□ -0.7
MCF2L-216ENST00000439475 RTL3Q8N8U3 475 aaKnown RBP10.7□□□□□ -0.7
MCF2L-216ENST00000439475 PIP4K2CQ8TBX8 421 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 SNX19Q92543 992 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 ARHGEF2Q92974 986 aaKnown RBP10.7□□□□□ -0.7
MCF2L-216ENST00000439475 TCEAL3Q969E4 200 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 SKA1Q96BD8 255 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 ANP32EQ9BTT0 268 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 ACE2Q9BYF1 805 aaPredicted RBP10.7□□□□□ -0.7
MCF2L-216ENST00000439475 TRIM5Q9C035 493 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 ZDHHC5Q9C0B5 715 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 NEUROG2Q9H2A3 272 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 KDM4CQ9H3R0 1056 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 PCSK1NQ9UHG2 260 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 IP6K2Q9UHH9 426 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 EIF2B4Q9UI10 523 aaKnown RBP10.7□□□□□ -0.7
MCF2L-216ENST00000439475 LCMT1Q9UIC8 334 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 AP4E1Q9UPM8 1137 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 GPR179Q6PRD1 2367 aa10.7□□□□□ -0.7
MCF2L-216ENST00000439475 TBC1D3DA0A087WVF3 549 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 TBC1D3IA0A087WXS9 549 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 A0A087X0T9 212 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 TBC1D3EA0A087X179 549 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 TBC1D3KA0A087X1G2 549 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 SSU72P8A0A1W2PR75 194 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 LNP1A1A4G5 178 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 TBC1D3FA6NER0 549 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 C4orf47A7E2U8 309 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 TBC1D3LB9A6J9 549 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 FAM72CH0Y354 149 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 EEF2KO00418 725 aaKnown RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 ARHGAP33O14559 1287 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 BCAT2O15382 392 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 KDELR3O43731 214 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 AKR1B10O60218 316 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 FSBPO95073 299 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 MT-CO1P00395 513 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 H2AFZP0C0S5 128 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 TBC1D3HP0C7X1 549 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 FAM228BP0C875 321 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 ENGP17813 658 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 MIPP30301 263 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 CHRNA3P32297 505 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 PCK1P35558 622 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 EIF4A3P38919 411 aaKnown RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 SERPINH1P50454 418 aaKnown RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 DNA2P51530 1060 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 GALCP54803 685 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 SNRPD1P62314 119 aaKnown RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 RAD51Q06609 339 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 HADHQ16836 314 aaKnown RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 UAP1L1Q3KQV9 507 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 CARD16Q5EG05 197 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 FAM72AQ5TYM5 149 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 KIAA0895LQ68EN5 471 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 TBC1D3GQ6DHY5 549 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 TBC1D3CQ6IPX1 549 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 FAM72DQ6L9T8 149 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 IL27RAQ6UWB1 636 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 LINGO4Q6UY18 593 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 Q6ZVU0 165 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 H2AFVQ71UI9 128 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 PRPF39Q86UA1 669 aaKnown RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 FAM72BQ86X60 149 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 DNAAF5Q86Y56 855 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 CNGA4Q8IV77 575 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 PLPP6Q8IY26 295 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 TBC1D3Q8IZP1 549 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 PYROXD2Q8N2H3 581 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 TMIEQ8NEW7 156 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 OR2T34Q8NGX1 318 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 OR14C36Q8NHC7 312 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 CASKIN2Q8WXE0 1202 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 CTNNBL1Q8WYA6 563 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 ISG20Q96AZ6 181 aaKnown RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 PPP1R16AQ96I34 528 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 CCDC42Q96M95 316 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 GTPBP2Q9BX10 602 aaKnown RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 MAGEB5Q9BZ81 275 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 THAP2Q9H0W7 228 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 C6orf106Q9H6K1 298 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 ZWILCHQ9H900 591 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 ARHGAP20Q9P2F6 1191 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 ZNF212Q9UDV6 495 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 PPM1HQ9ULR3 514 aa10.69□□□□□ -0.7
MCF2L-216ENST00000439475 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 MUC22E2RYF6 1773 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-216ENST00000439475 TNRC6BQ9UPQ9 1833 aaKnown RBP10.68□□□□□ -0.7
MCF2L-216ENST00000439475 DCDC2BA2VCK2 349 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms