RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 E2F2Q14209 437 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 BCL2A1Q16548 175 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 TTC39CQ8N584 583 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 DCPSQ96C86 337 aaKnown RBP16.06■□□□□ 0.16
DHFR-201ENST00000439211 TSNARE1Q96NA8 513 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 HMG20AQ9NP66 347 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 SMYD2Q9NRG4 433 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 TSPAN16Q9UKR8 245 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 NFASCO94856 1347 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 CCDC78A2IDD5 438 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 TYK2P29597 1187 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 CDKL1Q00532 357 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 GOLGA7BQ2TAP0 167 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 ZBED5Q49AG3 693 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 RNF111Q6ZNA4 994 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 TMEM192Q8IY95 271 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 WDTC1Q8N5D0 677 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 PDCD6IPQ8WUM4 868 aaKnown RBP16.06■□□□□ 0.16
DHFR-201ENST00000439211 TMEM134Q9H6X4 195 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 HMGXB4Q9UGU5 601 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 CAB39Q9Y376 341 aaPredicted RBP16.06■□□□□ 0.16
DHFR-201ENST00000439211 LACTBL1A8MY62 500 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 TPST1O60507 370 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 CLASP2O75122 1294 aaKnown RBP16.06■□□□□ 0.16
DHFR-201ENST00000439211 TRUB2O95900 331 aaKnown RBP16.06■□□□□ 0.16
DHFR-201ENST00000439211 EDN1P05305 212 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 TXNP10599 105 aaKnown RBP16.06■□□□□ 0.16
DHFR-201ENST00000439211 PHC1P78364 1004 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 AARS2Q5JTZ9 985 aaKnown RBP16.06■□□□□ 0.16
DHFR-201ENST00000439211 C16orf89Q6UX73 402 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 CCDC103Q8IW40 242 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 CHPT1Q8WUD6 406 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 HTRA1Q92743 480 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 EFHD2Q96C19 240 aaPredicted RBP16.06■□□□□ 0.16
DHFR-201ENST00000439211 C17orf80Q9BSJ5 609 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 FAM49AQ9H0Q0 323 aaPredicted RBP16.06■□□□□ 0.16
DHFR-201ENST00000439211 C1orf21Q9H246 121 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 PRM3Q9NNZ6 103 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 ARHGEF4Q9NR80 690 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 SLC8A2Q9UPR5 921 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 KCNH1O95259 989 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 KCNA4P22459 653 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 PTK2BQ14289 1009 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 TMEM132DQ14C87 1099 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 JADE1Q6IE81 842 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 ATG14Q6ZNE5 492 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 GPR180Q86V85 440 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 NT5C1AQ9BXI3 368 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 LYPLA1O75608 230 aaPredicted RBP16.05■□□□□ 0.16
DHFR-201ENST00000439211 HSDL1Q3SXM5 330 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 MMAAQ8IVH4 418 aaKnown RBP16.05■□□□□ 0.16
DHFR-201ENST00000439211 CIB1Q99828 191 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 OSBPL11Q9BXB4 747 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 SLC7A5P2Q9GIP4 190 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 GGA3Q9NZ52 723 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 TIMM22Q9Y584 194 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 MAFBQ9Y5Q3 323 aaPredicted RBP16.05■□□□□ 0.16
DHFR-201ENST00000439211 DGKBQ9Y6T7 804 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 SAC3D1A6NKF1 404 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 SNX16P57768 344 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 FAM209AQ5JX71 171 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 XYLT1Q86Y38 959 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 DCAKDQ8WVC6 231 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 PKP2Q99959 881 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 NR2E3Q9Y5X4 410 aa16.05■□□□□ 0.16
DHFR-201ENST00000439211 HSPA4LO95757 839 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 NR4A2P43354 598 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 CCT8P50990 548 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 GLRA4Q5JXX5 417 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 GJC2Q5T442 439 aaPredicted RBP16.04■□□□□ 0.16
DHFR-201ENST00000439211 FBXO16Q8IX29 292 aaPredicted RBP16.04■□□□□ 0.16
DHFR-201ENST00000439211 OR7G1Q8NGA0 311 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 SLC44A1Q8WWI5 657 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 COPS5Q92905 334 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 TWNKQ96RR1 684 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 COQ10BQ9H8M1 238 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 SORCS3Q9UPU3 1222 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 AURKCQ9UQB9 309 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 A0A087WZ62 844 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 VTNP04004 478 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 MAP3K7CLP57077 242 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 BOLA3Q53S33 107 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 ELMSAN1Q6PJG2 1045 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 CES3Q6UWW8 571 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 CCDC81Q6ZN84 652 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 CHSY1Q86X52 802 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 KIAA0319LQ8IZA0 1049 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 PIWIL2Q8TC59 973 aaKnown RBP16.04■□□□□ 0.16
DHFR-201ENST00000439211 FDXACB1Q9BRP7 624 aaPredicted RBP16.04■□□□□ 0.16
DHFR-201ENST00000439211 FRMD8P1Q9BZ68 369 aaPredicted RBP16.04■□□□□ 0.16
DHFR-201ENST00000439211 ING2Q9H160 280 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 ERGIC3Q9Y282 383 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 GOLGA8QA0A0J9YX86 632 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 GOLGA8OA6NCC3 632 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 GOLGA8NF8WBI6 632 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 TMX2-CTNND1H3BSU7 103 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 ATE1O95260 518 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 ALOX5P09917 674 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 KRT6CP48668 564 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 METTL7BQ6UX53 244 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms