RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 PCDH8O95206 1070 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 MT-CO1P00395 513 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 CHRNA3P32297 505 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 GPD2P43304 727 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 RPL34P49207 117 aaKnown RBP11.86□□□□□ -0.51
LINC00271-202ENST00000436554 HNRNPKP61978 463 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC00271-202ENST00000436554 PITX1P78337 314 aaPredicted RBP11.86□□□□□ -0.51
LINC00271-202ENST00000436554 CCDC15Q0P6D6 951 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 NFATC3Q12968 1075 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 EIF4EBP2Q13542 120 aaPredicted RBP11.86□□□□□ -0.51
LINC00271-202ENST00000436554 STILQ15468 1287 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 ZSCAN23Q3MJ62 389 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 ARL13BQ3SXY8 428 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 SEL1L3Q68CR1 1132 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 OR6B2Q6IFH4 312 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 FBXL22Q6P050 247 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 GUSBP11Q6P575 273 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 CRTC1Q6UUV9 634 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 GCNT7Q6ZNI0 430 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 BEND5Q7L4P6 421 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 EFL1Q7Z2Z2 1120 aaKnown RBP11.86□□□□□ -0.51
LINC00271-202ENST00000436554 ABI3BPQ7Z7G0 1075 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 SH2D3CQ8N5H7 860 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 ATP6V0D2Q8N8Y2 350 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 GRAMD1AQ96CP6 724 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 TRIM4Q9C037 500 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 WDR70Q9NW82 654 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC00271-202ENST00000436554 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
LINC00271-202ENST00000436554 PCDHGA8Q9Y5G5 932 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 ATP6V1DQ9Y5K8 247 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 OR51B4Q9Y5P0 310 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 HS3ST3A1Q9Y663 406 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 TDRD6O60522 2096 aaKnown RBP11.86□□□□□ -0.51
LINC00271-202ENST00000436554 COL12A1Q99715 3063 aa11.86□□□□□ -0.51
LINC00271-202ENST00000436554 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 POM121BA6NF01 834 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 TCAF2A6NFQ2 919 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 CDRT15L2A8MXV6 281 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 K7ERQ8 282 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 KPNA3O00505 521 aaPredicted RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 CASC3O15234 703 aaKnown RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 SART1O43290 800 aaKnown RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 LZTS3O60299 673 aaPredicted RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 TNFSF15O95150 251 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 PAK4O96013 591 aaPredicted RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 IGLV3-25P01717 112 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 ACADSBP45954 432 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 IRAK1P51617 712 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 CENPCQ03188 943 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 SRSF1Q07955 248 aaKnown RBP eCLIP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 CLN3Q13286 438 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 ZNF177Q13360 481 aaPredicted RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 FZD2Q14332 565 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 TAF5Q15542 800 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 RABGAP1LQ5R372 815 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 TTC39BQ5VTQ0 682 aaPredicted RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 ANKRD40Q6AI12 368 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 PTAR1Q7Z6K3 402 aaPredicted RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 DCP2Q8IU60 420 aaKnown RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 PPM1KQ8N3J5 372 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 RPRD1AQ96P16 312 aaPredicted RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 NT5C1BQ96P26 610 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 FAM117AQ9C073 453 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 SCAND2PQ9GZW5 306 aaPredicted RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 POPDC2Q9HBU9 364 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 KLF15Q9UIH9 416 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 VPS28Q9UK41 221 aa11.85□□□□□ -0.51
LINC00271-202ENST00000436554 HEMK1Q9Y5R4 338 aaPredicted RBP11.85□□□□□ -0.51
LINC00271-202ENST00000436554 SYNJ2BP-COX16A0A087WUM0 186 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 EME2A4GXA9 379 aaPredicted RBP11.84□□□□□ -0.51
LINC00271-202ENST00000436554 A6NNZ2 444 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 SLC16A3O15427 465 aaKnown RBP11.84□□□□□ -0.51
LINC00271-202ENST00000436554 CSF2P04141 144 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 SRCP12931 536 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 PRCPP42785 496 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 YWHAZP63104 245 aaKnown RBP11.84□□□□□ -0.51
LINC00271-202ENST00000436554 FKBP3Q00688 224 aaKnown RBP11.84□□□□□ -0.51
LINC00271-202ENST00000436554 AUHQ13825 339 aaKnown RBP11.84□□□□□ -0.51
LINC00271-202ENST00000436554 FGL2Q14314 439 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 DEFB133Q30KQ1 61 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 LINC00303Q3SY05 128 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 ARSIQ5FYB1 569 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 ZCCHC8Q6NZY4 707 aaKnown RBP11.84□□□□□ -0.51
LINC00271-202ENST00000436554 DENND1BQ6P3S1 775 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 KRBA2Q6ZNG9 492 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 RBM44Q6ZP01 1051 aaKnown RBP11.84□□□□□ -0.51
LINC00271-202ENST00000436554 ERN2Q76MJ5 926 aaKnown RBP11.84□□□□□ -0.51
LINC00271-202ENST00000436554 RRAGAQ7L523 313 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 ARL14Q8N4G2 192 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 ATP11CQ8NB49 1132 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 CHST14Q8NCH0 376 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 ZNF548Q8NEK5 533 aaPredicted RBP11.84□□□□□ -0.51
LINC00271-202ENST00000436554 TMIEQ8NEW7 156 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 OR2A12Q8NGT7 310 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 TPCN2Q8NHX9 752 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 FAM174AQ8TBP5 190 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 RNF34Q969K3 372 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 SLC35C1Q96A29 364 aa11.84□□□□□ -0.51
LINC00271-202ENST00000436554 MED15Q96RN5 788 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms