RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 RPS3AP61247 264 aaKnown RBP4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 NUCB1Q02818 461 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 DCTN2Q13561 401 aaKnown RBP4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 TBCEQ15813 527 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 TMEM81Q6P7N7 255 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 RBM44Q6ZP01 1051 aaKnown RBP4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 MRGPRGQ86SM5 289 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 TADA2BQ86TJ2 420 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 RFX6Q8HWS3 928 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 FAM185AQ8N0U4 392 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 SCAIQ8N9R8 606 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 C2CD4CQ8TF44 421 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 FAM149B1Q96BN6 582 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 NEUROD6Q96NK8 337 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 FRG2BQ96QU4 278 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 FCRL5Q96RD9 977 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 SEMA4BQ9NPR2 832 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 TLR8Q9NR97 1041 aaKnown RBP4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 TMEM248Q9NWD8 314 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 PEMTQ9UBM1 199 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 VPS28Q9UK41 221 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 SALL3Q9BXA9 1300 aa4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 ZNF335Q9H4Z2 1342 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P45-201ENST00000435986 A0A087X1B8 175 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 LRRC53A6NM62 1247 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 HNRNPCL1O60812 293 aaKnown RBP4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 GFPT2O94808 682 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 SERPINC1P01008 464 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 URODP06132 367 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 CYP2D6P10635 497 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 YWHAQP27348 245 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 TYK2P29597 1187 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 CPOXP36551 454 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 TUBA4AP68366 448 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 PRAMEP78395 509 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 CRYMQ14894 314 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 PLK5Q496M5 336 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 RILPL1Q5EBL4 403 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 ARL13AQ5H913 290 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 CFAP58Q5T655 872 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 PRAMEF17Q5VTA0 474 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 ATG9BQ674R7 924 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 TMEM154Q6P9G4 183 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 ZNF474Q6S9Z5 364 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 PRSS45Q7RTY3 260 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 RNF144BQ7Z419 303 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 MDGA2Q7Z553 956 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 NEK8Q86SG6 692 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 AMIGO2Q86SJ2 522 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 AMER2Q8N7J2 671 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 C1orf131Q8NDD1 294 aaKnown RBP4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 FAM110DQ8TAY7 271 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 NELL1Q92832 810 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 REPS1Q96D71 796 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 ZNF347Q96SE7 839 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 H2AFJQ9BTM1 129 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 TXNRD2Q9NNW7 524 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 ASB6Q9NWX5 421 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 UPB1Q9UBR1 384 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 LIMA1Q9UHB6 759 aaKnown RBP4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 GPR34Q9UPC5 381 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 RPS6KL1Q9Y6S9 549 aa4.85□□□□□ -1.63
HMGB1P45-201ENST00000435986 KDM3AQ9Y4C1 1321 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 PLAUP00749 431 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 LAMP2P13473 410 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 ZNF8P17098 575 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 CDH2P19022 906 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 TACR2P21452 398 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 MCCP23508 829 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 IDUAP35475 653 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 MLH1P40692 756 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 GABRB2P47870 512 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 ELLP55199 621 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 CUL4AQ13619 759 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 VEPH1Q14D04 833 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 TAF11Q15544 211 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 GPATCH4Q5T3I0 446 aaKnown RBP4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 ISM2Q6H9L7 571 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 NCAPH2Q6IBW4 605 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 CRIP3Q6Q6R5 217 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 ZNF813Q6ZN06 617 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 PXKQ7Z7A4 578 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 ADGRF4Q8IZF3 695 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 OSR1Q8TAX0 266 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 NEK9Q8TD19 979 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 OTULINQ96BN8 352 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 KLHL15Q96M94 604 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 NR1H4Q96RI1 486 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 NCAPGQ9BPX3 1015 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 LMAN2LQ9H0V9 348 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 SLC32A1Q9H598 525 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 IL17RBQ9NRM6 502 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 HCFC1R1Q9NWW0 138 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 POLG2Q9UHN1 485 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 PCDHGB5Q9Y5G0 923 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 CLDN16Q9Y5I7 305 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 HS3ST3A1Q9Y663 406 aa4.84□□□□□ -1.63
HMGB1P45-201ENST00000435986 RUSC2Q8N2Y8 1516 aa4.83□□□□□ -1.64
HMGB1P45-201ENST00000435986 TCRBV7S3A2A0A539 114 aa4.83□□□□□ -1.64
HMGB1P45-201ENST00000435986 A6NCN8 305 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms