RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 LIMK2P53671 638 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 COG7P83436 770 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 PPIDQ08752 370 aaKnown RBP10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 CBX3Q13185 183 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 DNAL1Q4LDG9 190 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 ARHGAP36Q6ZRI8 547 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 FRMD7Q6ZUT3 714 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 OTOP3Q7RTS5 596 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 USP33Q8TEY7 942 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 TRAPPC9Q96Q05 1148 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 COG4Q9H9E3 785 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 CASS4Q9NQ75 786 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 ZNF212Q9UDV6 495 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 FBXW11Q9UKB1 542 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 PACSIN3Q9UKS6 424 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 LRCH1Q9Y2L9 728 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 SLC4A7Q9Y6M7 1214 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 DCXO43602 365 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 C2P06681 752 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 CHRNGP07510 517 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 SAT1P21673 171 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 HARS2P49590 506 aaKnown RBP10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 PSEN2P49810 448 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 TRMT5Q32P41 509 aaKnown RBP10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 CCDC92Q53HC0 331 aaPredicted RBP10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 GRTP1Q5TC63 336 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 PDPK2PQ6A1A2 396 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 FAM35AQ86V20 835 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 ARHGAP18Q8N392 663 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 ZSCAN18Q8TBC5 510 aaPredicted RBP10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 GAD1Q99259 594 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 CENPKQ9BS16 269 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 C1orf21Q9H246 121 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 MAGEA13PA6NCF6 341 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 TK2O00142 265 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 MAP3K7O43318 606 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 XPOTO43592 962 aaKnown RBP10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 LRIG2O94898 1065 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 JCHAINP01591 159 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 MYL3P08590 195 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 AXLP30530 894 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 LRPAP1P30533 357 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 INSCQ1MX18 579 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 PAN2Q504Q3 1202 aaKnown RBP10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 SLC44A4Q53GD3 710 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 CNTD1Q8N815 330 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 SPATA22Q8NHS9 363 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 PPP4R1Q8TF05 950 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 GTF3C2Q8WUA4 911 aaPredicted RBP10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 OR52B2Q96RD2 323 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 COLEC11Q9BWP8 271 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 UNKQ9C0B0 810 aaKnown RBP10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 IARS2Q9NSE4 1012 aaKnown RBP10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 BFARQ9NZS9 450 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 GOLGA8QA0A0J9YX86 632 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 GOLGA8OA6NCC3 632 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 GOLGA8NF8WBI6 632 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 TXNDC9O14530 226 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 CIB2O75838 187 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 LRRC36Q1X8D7 754 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 CLEC14AQ86T13 490 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 HIPK4Q8NE63 616 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 URGCPQ8TCY9 931 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 ISL2Q96A47 359 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 ZNF184Q99676 751 aaPredicted RBP10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 TKTL2Q9H0I9 626 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 C20orf96Q9NUD7 363 aaPredicted RBP10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 OR12D3Q9UGF7 316 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 CPA4Q9UI42 421 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 HHLA1C9JL84 531 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 PHGDHO43175 533 aaKnown RBP10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 ALOX15P16050 662 aaPredicted RBP10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 GRK2P25098 689 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 SPRP35270 261 aaPredicted RBP10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 GARSP41250 739 aaKnown RBP10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 COPAP53621 1224 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 CDC42EP1Q00587 391 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 NAB1Q13506 487 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 TBCCQ15814 346 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 IZUMO2Q6UXV1 221 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 RAPH1Q70E73 1250 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 KCNMB4Q86W47 210 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 DPF3Q92784 378 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 FERMT1Q9BQL6 677 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 GBA3Q9H227 469 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 WDR55Q9H6Y2 383 aaPredicted RBP10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 PHF24Q9UPV7 400 aa10.6□□□□□ -0.71
CLSTN1-203ENST00000435891 TTC3P53804 2025 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 CASTOR2A6NHX0 329 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 HAS3O00219 553 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 MT-CYBP00156 380 aaPredicted RBP10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 SBK3P0C264 359 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 ZNF865P0CJ78 1059 aaPredicted RBP10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 MX2P20592 715 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 GJA8P48165 433 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 GLRBP48167 497 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 SERPINB8P50452 374 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 SCAPQ12770 1279 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 ZNF460Q14592 562 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 GRM3Q14832 879 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms