RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 LMNAP02545 664 aaKnown RBP15.86■□□□□ 0.13
SCARF1-203ENST00000434376 ODC1P11926 461 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 TCN1P20061 433 aaPredicted RBP15.86■□□□□ 0.13
SCARF1-203ENST00000434376 ADAM17P78536 824 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 C6orf163Q5TEZ5 329 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 FAM171A1Q5VUB5 890 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 ESRP1Q6NXG1 681 aaKnown RBP15.86■□□□□ 0.13
SCARF1-203ENST00000434376 C17orf99Q6UX52 265 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 ZDHHC17Q8IUH5 632 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 SLC41A1Q8IVJ1 513 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 TOP6BLQ8N6T0 577 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 SNX15Q9NRS6 342 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 BNIP3LO60238 219 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 IRF1P10914 325 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 CD68P34810 354 aaPredicted RBP15.86■□□□□ 0.13
SCARF1-203ENST00000434376 ETV4P43268 484 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 LHX1P48742 406 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 PDCD2Q16342 344 aaPredicted RBP15.86■□□□□ 0.13
SCARF1-203ENST00000434376 ALKBH8Q96BT7 664 aaKnown RBP15.86■□□□□ 0.13
SCARF1-203ENST00000434376 SLC38A7Q9NVC3 462 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 TAS2R1Q9NYW7 299 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 GPR182O15218 404 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 DDHD2O94830 711 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 CHRNGP07510 517 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 GSTT1P30711 240 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 SERPINB5P36952 375 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 NR2C2P49116 596 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 FSTL4Q6MZW2 842 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 DEFB128Q7Z7B8 93 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 KCNMB4Q86W47 210 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 GALNT15Q8N3T1 639 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 KCTD4Q8WVF5 259 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 SMIM14Q96QK8 99 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 FRMD8P1Q9BZ68 369 aaPredicted RBP15.86■□□□□ 0.13
SCARF1-203ENST00000434376 PLA2G4CQ9UP65 541 aa15.86■□□□□ 0.13
SCARF1-203ENST00000434376 DCXO43602 365 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 DUSP11O75319 330 aaKnown RBP15.85■□□□□ 0.13
SCARF1-203ENST00000434376 WARSP23381 471 aaKnown RBP15.85■□□□□ 0.13
SCARF1-203ENST00000434376 AXLP30530 894 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 CNTD1Q8N815 330 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.85■□□□□ 0.13
SCARF1-203ENST00000434376 SUDS3Q9H7L9 328 aaPredicted RBP15.85■□□□□ 0.13
SCARF1-203ENST00000434376 DERAQ9Y315 318 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 CNTN5O94779 1100 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 ARL1P40616 181 aaPredicted RBP15.85■□□□□ 0.13
SCARF1-203ENST00000434376 SLC1A6P48664 564 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 USP46P62068 366 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 CDC42EP1Q00587 391 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 MPP3Q13368 585 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 SEMA5AQ13591 1074 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 ITGA7Q13683 1181 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 LPIN1Q14693 890 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 PRKD1Q15139 912 aaPredicted RBP15.85■□□□□ 0.13
SCARF1-203ENST00000434376 ATG16L1Q676U5 607 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 RAP1GAP2Q684P5 730 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 PDZD4Q76G19 769 aaPredicted RBP15.85■□□□□ 0.13
SCARF1-203ENST00000434376 KBTBD2Q8IY47 623 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 ZNF276Q8N554 614 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 RTP3Q9BQQ7 232 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 MLPHQ9BV36 600 aaPredicted RBP15.85■□□□□ 0.13
SCARF1-203ENST00000434376 DMAP1Q9NPF5 467 aaPredicted RBP15.85■□□□□ 0.13
SCARF1-203ENST00000434376 FBXW11Q9UKB1 542 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 TLK1Q9UKI8 766 aa15.85■□□□□ 0.13
SCARF1-203ENST00000434376 ZNF638Q14966 1978 aaKnown RBP15.85■□□□□ 0.13
SCARF1-203ENST00000434376 KLHL33A6NCF5 533 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 DLDP09622 509 aaKnown RBP15.84■□□□□ 0.13
SCARF1-203ENST00000434376 CCNG1P51959 295 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 CCL23P55773 120 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 UPP1Q16831 310 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 LRRC23Q53EV4 343 aaPredicted RBP15.84■□□□□ 0.13
SCARF1-203ENST00000434376 C10orf120Q5SQS8 335 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 GLB1LQ6UWU2 654 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 CENPIQ92674 756 aaPredicted RBP15.84■□□□□ 0.13
SCARF1-203ENST00000434376 PHF21BQ96EK2 531 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 KCNK13Q9HB14 408 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 SMPD4Q9NXE4 827 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 CRYL1Q9Y2S2 319 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 NAGLUP54802 743 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 CDK16Q00536 496 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 GRM3Q14832 879 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 RALGPS1Q5JS13 557 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 PSTKQ8IV42 348 aaKnown RBP15.84■□□□□ 0.13
SCARF1-203ENST00000434376 THEM5Q8N1Q8 247 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 ZNF184Q99676 751 aaPredicted RBP15.84■□□□□ 0.13
SCARF1-203ENST00000434376 SLC39A8Q9C0K1 460 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 MANSC4A6NHS7 340 aaPredicted RBP15.84■□□□□ 0.13
SCARF1-203ENST00000434376 TMEM233B4DJY2 109 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 J3KR12 359 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 HAS3O00219 553 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 RTN3O95197 1032 aaPredicted RBP15.84■□□□□ 0.13
SCARF1-203ENST00000434376 HDCP19113 662 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 GEN1Q17RS7 908 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 ANKRD20A4Q4UJ75 823 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 TCHHL1Q5QJ38 904 aaPredicted RBP15.84■□□□□ 0.13
SCARF1-203ENST00000434376 FOXB2Q5VYV0 432 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 ATG14Q6ZNE5 492 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 KCNN1Q92952 543 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 DHRS4Q9BTZ2 278 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 PRM3Q9NNZ6 103 aa15.84■□□□□ 0.13
SCARF1-203ENST00000434376 NDC80O14777 642 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms