RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 DSG4Q86SJ6 1040 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 CCDC50Q8IVM0 306 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 UMODL1-AS1Q8N2C9 162 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 LZTR1Q8N653 840 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 NETO2Q8NC67 525 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 ZBTB44Q8NCP5 570 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 TPCN2Q8NHX9 752 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 KIAA1524Q8TCG1 905 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 GAB3Q8WWW8 586 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 OR8D1Q8WZ84 308 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 MYO19Q96H55 970 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 MRGPRX1Q96LB2 322 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 HINFPQ9BQA5 517 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 MKRN2Q9H000 416 aaKnown RBP15.85■□□□□ 0.13
TREX1-201ENST00000433541 TNKS2Q9H2K2 1166 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 RCOR3Q9P2K3 495 aaPredicted RBP15.85■□□□□ 0.13
TREX1-201ENST00000433541 TRIM10Q9UDY6 481 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 CYP8B1Q9UNU6 501 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 HS3ST2Q9Y278 367 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 FCF1Q9Y324 198 aaKnown RBP15.85■□□□□ 0.13
TREX1-201ENST00000433541 RALGAPA1Q6GYQ0 2036 aa15.85■□□□□ 0.13
TREX1-201ENST00000433541 PLXND1Q9Y4D7 1925 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 TARSL2A2RTX5 802 aaKnown RBP15.84■□□□□ 0.13
TREX1-201ENST00000433541 BTNL10A8MVZ5 291 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 PJA2O43164 708 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 PSTPIP1O43586 416 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 KDELR3O43731 214 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 ZNF217O75362 1048 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 IL1BP01584 269 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 PSMD8P48556 350 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 SERPINH1P50454 418 aaKnown RBP15.84■□□□□ 0.13
TREX1-201ENST00000433541 PAPOLAP51003 745 aaKnown RBP15.84■□□□□ 0.13
TREX1-201ENST00000433541 CLCN6P51797 869 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 ARF5P84085 180 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 SLC20A2Q08357 652 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 SERINC3Q13530 473 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 ANKRD20A8PQ5CZ79 823 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 FAM124AQ86V42 546 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 RFX6Q8HWS3 928 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 STK40Q8N2I9 435 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 NKD2Q969F2 451 aaPredicted RBP15.84■□□□□ 0.13
TREX1-201ENST00000433541 RNF25Q96BH1 459 aaPredicted RBP15.84■□□□□ 0.13
TREX1-201ENST00000433541 ZNF670Q9BS34 389 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 ACE2Q9BYF1 805 aaPredicted RBP15.84■□□□□ 0.13
TREX1-201ENST00000433541 TM6SF2Q9BZW4 377 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 SLC39A8Q9C0K1 460 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 SALL4Q9UJQ4 1053 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 GUCA1BQ9UMX6 200 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 ARIH1Q9Y4X5 557 aaPredicted RBP15.84■□□□□ 0.13
TREX1-201ENST00000433541 ADGRG1Q9Y653 693 aa15.84■□□□□ 0.13
TREX1-201ENST00000433541 DCLK1O15075 740 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 HRO43593 1189 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 ATP9BO43861 1147 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 NDUFS2O75306 463 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 KDELR1P24390 212 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 COPAP53621 1224 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 ELAVL3Q14576 367 aaKnown RBP15.83■□□□□ 0.12
TREX1-201ENST00000433541 ELF2Q15723 593 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 C9orf64Q5T6V5 341 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 LRRC38Q5VT99 294 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 MMAAQ8IVH4 418 aaKnown RBP15.83■□□□□ 0.12
TREX1-201ENST00000433541 SYCE1Q8N0S2 351 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 ATPAF2Q8N5M1 289 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 NPWQ8N729 165 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 RAPGEF5Q92565 580 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 NELL1Q92832 810 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 PTPRN2Q92932 1015 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 ZNF830Q96NB3 372 aaPredicted RBP15.83■□□□□ 0.12
TREX1-201ENST00000433541 NOL6Q9H6R4 1146 aaKnown RBP15.83■□□□□ 0.12
TREX1-201ENST00000433541 LRRC19Q9H756 370 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 LZTFL1Q9NQ48 299 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 ETNK2Q9NVF9 386 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 UBA2Q9UBT2 640 aaPredicted RBP15.83■□□□□ 0.12
TREX1-201ENST00000433541 NCKAP1Q9Y2A7 1128 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 MFHAS1Q9Y4C4 1052 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 ACTL7AQ9Y615 435 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 SDK1Q7Z5N4 2213 aa15.83■□□□□ 0.12
TREX1-201ENST00000433541 ABCA7Q8IZY2 2146 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 C1QTNF3-AMACRE9PGA6 284 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 SMAD6O43541 496 aaKnown RBP15.82■□□□□ 0.12
TREX1-201ENST00000433541 LILRB5O75023 590 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 ZMPSTE24O75844 475 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 NEBLO76041 1014 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 NBL1P41271 181 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 RHOAP61586 193 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 DYNLT1P63172 113 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 CCZ1BP86790 482 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 CCZ1P86791 482 aaPredicted RBP15.82■□□□□ 0.12
TREX1-201ENST00000433541 SFSWAPQ12872 951 aaKnown RBP15.82■□□□□ 0.12
TREX1-201ENST00000433541 CST6Q15828 149 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 PEX26Q7Z412 305 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 METTL3Q86U44 580 aaKnown RBP15.82■□□□□ 0.12
TREX1-201ENST00000433541 C11orf74Q86VG3 221 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 FAM160A2Q8N612 972 aaPredicted RBP15.82■□□□□ 0.12
TREX1-201ENST00000433541 PCDH20Q8N6Y1 951 aaKnown RBP15.82■□□□□ 0.12
TREX1-201ENST00000433541 PAF1Q8N7H5 531 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 GRIN3AQ8TCU5 1115 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 NSMCE1Q8WV22 266 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 FAM122AQ96E09 287 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 OMDQ99983 421 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms