RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 KATNAL2Q8IYT4 538 aa25.66■■□□□ 1.7
CPNE1-212ENST00000430570 MKRN2Q9H000 416 aaKnown RBP25.66■■□□□ 1.7
CPNE1-212ENST00000430570 KCNH6Q9H252 994 aa25.66■■□□□ 1.7
CPNE1-212ENST00000430570 EBF1Q9UH73 591 aa25.66■■□□□ 1.7
CPNE1-212ENST00000430570 HPCAL4Q9UM19 191 aa25.66■■□□□ 1.7
CPNE1-212ENST00000430570 HCN4Q9Y3Q4 1203 aa25.66■■□□□ 1.7
CPNE1-212ENST00000430570 PCDHA3Q9Y5H8 950 aa25.66■■□□□ 1.7
CPNE1-212ENST00000430570 NYNRINQ9P2P1 1898 aaKnown RBP25.66■■□□□ 1.7
CPNE1-212ENST00000430570 ARHGAP42A6NI28 874 aa25.65■■□□□ 1.7
CPNE1-212ENST00000430570 J3KR12 359 aa25.65■■□□□ 1.7
CPNE1-212ENST00000430570 ALDH1A2O94788 518 aa25.65■■□□□ 1.7
CPNE1-212ENST00000430570 NDUFV2P19404 249 aa25.65■■□□□ 1.7
CPNE1-212ENST00000430570 CTNNA2P26232 953 aa25.65■■□□□ 1.7
CPNE1-212ENST00000430570 SERPINH1P50454 418 aaKnown RBP25.65■■□□□ 1.7
CPNE1-212ENST00000430570 SLC20A2Q08357 652 aa25.65■■□□□ 1.7
CPNE1-212ENST00000430570 LLGL1Q15334 1064 aa25.65■■□□□ 1.7
CPNE1-212ENST00000430570 PEX26Q7Z412 305 aa25.65■■□□□ 1.7
CPNE1-212ENST00000430570 TPSD1Q9BZJ3 242 aa25.65■■□□□ 1.7
CPNE1-212ENST00000430570 AMFRQ9UKV5 643 aa25.65■■□□□ 1.7
CPNE1-212ENST00000430570 PACSIN2Q9UNF0 486 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-212ENST00000430570 FCF1Q9Y324 198 aaKnown RBP25.65■■□□□ 1.7
CPNE1-212ENST00000430570 EDDM13A0A1B0GTR0 161 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 TARSL2A2RTX5 802 aaKnown RBP25.64■■□□□ 1.7
CPNE1-212ENST00000430570 ZNF487B1APH4 448 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 AXIN1O15169 862 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 MFSD11O43934 449 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 ZNF821O75541 412 aaPredicted RBP25.64■■□□□ 1.7
CPNE1-212ENST00000430570 PEX5P50542 639 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 PAFAH1B3Q15102 231 aaKnown RBP25.64■■□□□ 1.7
CPNE1-212ENST00000430570 TAZQ16635 292 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 WDR5BQ86VZ2 330 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 LONP2Q86WA8 852 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 TMPRSS6Q8IU80 811 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 SYCE1Q8N0S2 351 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 PGBD3Q8N328 593 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 OR2T3Q8NH03 318 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 MRGPRX1Q96LB2 322 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 PDFQ9HBH1 243 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 ZSCAN32Q9NX65 697 aa25.64■■□□□ 1.7
CPNE1-212ENST00000430570 BCCIPQ9P287 314 aaKnown RBP eCLIP25.64■■□□□ 1.75e-7■■■□□ 17.8
CPNE1-212ENST00000430570 ZRANB2O95218 330 aaKnown RBP eCLIP25.63■■□□□ 1.691e-6■■□□□ 12.9
CPNE1-212ENST00000430570 CDKN2BP42772 138 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 PTPN5P54829 565 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 NRLP54845 237 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 ODF2Q5BJF6 829 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 SPOCD1Q6ZMY3 1216 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 Q6ZVU0 165 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 VSIG1Q86XK7 387 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 RCOR2Q8IZ40 523 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 STK40Q8N2I9 435 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 ZBTB44Q8NCP5 570 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 FAM129BQ96TA1 746 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 FAM126AQ9BYI3 521 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-212ENST00000430570 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.63■■□□□ 1.69
CPNE1-212ENST00000430570 CCDC163A0A0D9SF12 145 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 PRAMEF11O60813 436 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 MAP3K6O95382 1288 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 KRT10P13645 584 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 CLCN6P51797 869 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 SLC10A2Q12908 348 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-212ENST00000430570 SRSF5Q13243 272 aaKnown RBP25.63■■□□□ 1.69
CPNE1-212ENST00000430570 C22orf39Q6P5X5 142 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 CACUL1Q86Y37 369 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 RFX6Q8HWS3 928 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 REXO1L1PQ8IX06 675 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 PLD5Q8N7P1 536 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 EXD1Q8NHP7 514 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 ALG3Q92685 438 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 MAK16Q9BXY0 300 aaKnown RBP25.63■■□□□ 1.69
CPNE1-212ENST00000430570 TNKS2Q9H2K2 1166 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 CD93Q9NPY3 652 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 IPO11Q9UI26 975 aaKnown RBP25.63■■□□□ 1.69
CPNE1-212ENST00000430570 R4GN57 208 aa25.63■■□□□ 1.69
CPNE1-212ENST00000430570 CXorf51AA0A1B0GTR3 108 aa25.62■■□□□ 1.69
CPNE1-212ENST00000430570 CCDC66A2RUB6 948 aa25.62■■□□□ 1.69
CPNE1-212ENST00000430570 ZSCAN5CA6NGD5 496 aaPredicted RBP25.62■■□□□ 1.69
CPNE1-212ENST00000430570 DDX3YO15523 660 aaKnown RBP25.62■■□□□ 1.69
CPNE1-212ENST00000430570 BNIP3LO60238 219 aa25.62■■□□□ 1.69
CPNE1-212ENST00000430570 SERPINB6P35237 376 aa25.62■■□□□ 1.69
CPNE1-212ENST00000430570 GBE1Q04446 702 aa25.62■■□□□ 1.69
CPNE1-212ENST00000430570 SLC9A4Q6AI14 798 aa25.62■■□□□ 1.69
CPNE1-212ENST00000430570 PRDM16Q9HAZ2 1276 aa25.62■■□□□ 1.69
CPNE1-212ENST00000430570 FAM86C1Q9NVL1 165 aa25.62■■□□□ 1.69
CPNE1-212ENST00000430570 INVSQ9Y283 1065 aa25.62■■□□□ 1.69
CPNE1-212ENST00000430570 EML5Q05BV3 1969 aa25.61■■□□□ 1.69
CPNE1-212ENST00000430570 ZBTB24O43167 697 aaPredicted RBP25.61■■□□□ 1.69
CPNE1-212ENST00000430570 HRO43593 1189 aa25.61■■□□□ 1.69
CPNE1-212ENST00000430570 RPS14P62263 151 aaKnown RBP25.61■■□□□ 1.69
CPNE1-212ENST00000430570 ADCY2Q08462 1091 aa25.61■■□□□ 1.69
CPNE1-212ENST00000430570 CYTH1Q15438 398 aa25.61■■□□□ 1.69
CPNE1-212ENST00000430570 KAZNQ674X7 775 aa25.61■■□□□ 1.69
CPNE1-212ENST00000430570 AADACL2Q6P093 401 aa25.61■■□□□ 1.69
CPNE1-212ENST00000430570 KIAA1324Q6UXG2 1013 aaKnown RBP25.61■■□□□ 1.69
CPNE1-212ENST00000430570 OR2A12Q8NGT7 310 aa25.61■■□□□ 1.69
CPNE1-212ENST00000430570 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.61■■□□□ 1.69
CPNE1-212ENST00000430570 LRRN4Q8WUT4 740 aa25.61■■□□□ 1.69
CPNE1-212ENST00000430570 RLN3Q8WXF3 142 aa25.61■■□□□ 1.69
CPNE1-212ENST00000430570 ATOH1Q92858 354 aaPredicted RBP25.61■■□□□ 1.69
CPNE1-212ENST00000430570 CEP44Q9C0F1 390 aa25.61■■□□□ 1.69
CPNE1-212ENST00000430570 RSPH9Q9H1X1 276 aaPredicted RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms