RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 SIRPGQ9P1W8 387 aa9.44□□□□□ -0.9
LSG1-202ENST00000427461 DKK3Q9UBP4 350 aa9.44□□□□□ -0.9
LSG1-202ENST00000427461 ERRFI1Q9UJM3 462 aaPredicted RBP9.44□□□□□ -0.9
LSG1-202ENST00000427461 PCNX1Q96RV3 2341 aa9.44□□□□□ -0.9
LSG1-202ENST00000427461 TRPM6Q9BX84 2022 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 ZNF106Q9H2Y7 1883 aaKnown RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 EFCAB7A8K855 629 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 ZNF891A8MT65 544 aaPredicted RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 HAX1O00165 279 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 KIAA0391O15091 583 aaKnown RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 YY2O15391 372 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 EPB41L2O43491 1005 aaKnown RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 CNTN5O94779 1100 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 PAK4O96013 591 aaPredicted RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 OAS2P29728 719 aaKnown RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 UGT1A3P35503 534 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 ATP1A2P50993 1020 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 BIRC3Q13489 604 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 PDE1CQ14123 709 aaPredicted RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 C16orf72Q14CZ0 275 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 TCEA2Q15560 299 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 PPP1R26Q5T8A7 1209 aaPredicted RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 ATP1A1-AS1Q5TC04 95 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 FAM46CQ5VWP2 391 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 NADSYN1Q6IA69 706 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 SPOPLQ6IQ16 392 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 ESRP1Q6NXG1 681 aaKnown RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 BHLHA9Q7RTU4 235 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 DCP2Q8IU60 420 aaKnown RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 Q8N9G6 341 aaPredicted RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 KYQ8NBH2 561 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 PRR7Q8TB68 274 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 PLEKHO2Q8TD55 490 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 OR8D1Q8WZ84 308 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 AK8Q96MA6 479 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 CMKLR1Q99788 373 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 IPO11Q9UI26 975 aaKnown RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 PPM1HQ9ULR3 514 aa9.43□□□□□ -0.9
LSG1-202ENST00000427461 HBS1LQ9Y450 684 aaKnown RBP9.43□□□□□ -0.9
LSG1-202ENST00000427461 ARHGAP10A1A4S6 786 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 LMO7DNF2Z398 122 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 CLIC2O15247 247 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 SLC26A4O43511 780 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 STX6O43752 255 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 BNIP3LO60238 219 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 PCDH8O95206 1070 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 CD2BP2O95400 341 aaKnown RBP9.42□□□□□ -0.9
LSG1-202ENST00000427461 VNN1O95497 513 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 LATS1O95835 1130 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 LDLRP01130 860 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 ANXA6P08133 673 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 IDEP14735 1019 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 GAP43P17677 238 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 ITGB7P26010 798 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 HOXD13P35453 343 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 CDC20Q12834 499 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 CDH18Q13634 790 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 NCOA4Q13772 614 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 ARL6IP4Q66PJ3 421 aaKnown RBP9.42□□□□□ -0.9
LSG1-202ENST00000427461 KYAT3Q6YP21 454 aaKnown RBP9.42□□□□□ -0.9
LSG1-202ENST00000427461 UNC93AQ86WB7 457 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 ARHGAP18Q8N392 663 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 APOBEC4Q8WW27 367 aaKnown RBP9.42□□□□□ -0.9
LSG1-202ENST00000427461 MARVELD3Q96A59 401 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 HEXIM2Q96MH2 286 aaKnown RBP9.42□□□□□ -0.9
LSG1-202ENST00000427461 EPAS1Q99814 870 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 LRRC61Q9BV99 259 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 DUSP16Q9BY84 665 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 UNKQ9C0B0 810 aaKnown RBP9.42□□□□□ -0.9
LSG1-202ENST00000427461 SEMA6CQ9H3T2 930 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 OLFML3Q9NRN5 406 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 SPASTQ9UBP0 616 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 APOBEC3BQ9UH17 382 aaKnown RBP9.42□□□□□ -0.9
LSG1-202ENST00000427461 HS3ST3A1Q9Y663 406 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 RNF215Q9Y6U7 377 aa9.42□□□□□ -0.9
LSG1-202ENST00000427461 TNRC6AQ8NDV7 1962 aaKnown RBP9.42□□□□□ -0.9
LSG1-202ENST00000427461 C1QTNF3-AMACRE9PGA6 284 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 ACSL4O60488 711 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 LUC7L3O95232 432 aaKnown RBP9.41□□□□□ -0.9
LSG1-202ENST00000427461 PDGFAP04085 211 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 CTSLP07711 333 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 TSHRP16473 764 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 ZNF18P17022 549 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 CYP2J2P51589 502 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 ACCSLQ4AC99 568 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 TMEM259Q4ZIN3 620 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 PHF19Q5T6S3 580 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 TMEM164Q5U3C3 297 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 NEK5Q6P3R8 708 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 Q6ZVU0 165 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 ASB18Q6ZVZ8 466 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 PIGZQ86VD9 579 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 PHACTR4Q8IZ21 702 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 CACNA2D3Q8IZS8 1091 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 ZNF557Q8N988 423 aaPredicted RBP9.41□□□□□ -0.9
LSG1-202ENST00000427461 HJURPQ8NCD3 748 aaPredicted RBP9.41□□□□□ -0.9
LSG1-202ENST00000427461 SLC45A3Q96JT2 553 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 ULBP1Q9BZM6 244 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 CDH19Q9H159 772 aa9.41□□□□□ -0.9
LSG1-202ENST00000427461 NUCKS1Q9H1E3 243 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms