RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CAMTA2O94983 1202 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 CTSHP09668 335 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 ZNF157P51786 506 aaPredicted RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 TRMT11Q7Z4G4 463 aaKnown RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 ARMC8Q8IUR7 673 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 SYT12Q8IV01 421 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 PCSK9Q8NBP7 692 aaKnown RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 GJD4Q96KN9 370 aaPredicted RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 VPS4AQ9UN37 437 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 A0A096LPK6 155 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 OLFML2AQ68BL7 652 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 BHLHE22Q8NFJ8 381 aaPredicted RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 CERKQ8TCT0 537 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 TCP10LQ8TDR4 215 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 FAM151AQ8WW52 585 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 NELL1Q92832 810 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 BORCS5Q969J3 196 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 PI4K2AQ9BTU6 479 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 MROH8Q9H579 483 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 RASSF1Q9NS23 344 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 MCM8Q9UJA3 840 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 DMTF1Q9Y222 760 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 CHKBQ9Y259 395 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 TMCC2O75069 709 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 MTAPQ13126 283 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 ZNF621Q6ZSS3 439 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 ENGASEQ8NFI3 743 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 ZNF668Q96K58 619 aaPredicted RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 ZNF214Q9UL59 606 aaPredicted RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 BMP7P18075 431 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 TYMPP19971 482 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 AXLP30530 894 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 TCF7P36402 384 aaPredicted RBP14.63□□□□□ -0.07
PTPN13-203ENST00000427191 ARFIP1P53367 373 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 ZNF75CPQ92670 426 aaPredicted RBP14.63□□□□□ -0.07
PTPN13-203ENST00000427191 ZDHHC15Q96MV8 337 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 USP32Q8NFA0 1604 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.63□□□□□ -0.07
PTPN13-203ENST00000427191 SLC25A12O75746 678 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 PTPN11Q06124 597 aaPredicted RBP14.63□□□□□ -0.07
PTPN13-203ENST00000427191 SWI5Q1ZZU3 235 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 HKDC1Q2TB90 917 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 PHC3Q8NDX5 983 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 TEX47Q8TBZ9 253 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 FBXO25Q8TCJ0 367 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 HGH1Q9BTY7 390 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 SNX4O95219 450 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 ENPEPQ07075 957 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 TRIM40Q6P9F5 258 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 CLK4Q9HAZ1 481 aaKnown RBP14.63□□□□□ -0.07
PTPN13-203ENST00000427191 CRB1P82279 1406 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 ERCC2P18074 760 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 FGFR2P21802 821 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 PCBP1Q15365 356 aaKnown RBP eCLIP14.63□□□□□ -0.07
PTPN13-203ENST00000427191 RNF43Q68DV7 783 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 GMPPBQ9Y5P6 360 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 AK5Q9Y6K8 562 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 IDO1P14902 403 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 LSM12Q3MHD2 195 aaKnown RBP14.63□□□□□ -0.07
PTPN13-203ENST00000427191 IL27RAQ6UWB1 636 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 OFCC1Q8IZS5 231 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 B3GALT6Q96L58 329 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 CDRT15Q96T59 188 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 KAT6AQ92794 2004 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 CDH4P55283 916 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 GCNT1Q02742 428 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 PRR23BQ6ZRT6 265 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 ACTL9Q8TC94 416 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 GRIP2Q9C0E4 1043 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 MRTO4Q9UKD2 239 aaKnown RBP14.63□□□□□ -0.07
PTPN13-203ENST00000427191 NCKAP1Q9Y2A7 1128 aa14.63□□□□□ -0.07
PTPN13-203ENST00000427191 ABHD2P08910 425 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 ABRAQ8N0Z2 381 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 ELOVL4Q9GZR5 314 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 RBM22Q9NW64 420 aaKnown RBP eCLIP14.62□□□□□ -0.07
PTPN13-203ENST00000427191 OAFQ86UD1 273 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 GRPEL2Q8TAA5 225 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 AHCYL2Q96HN2 611 aaKnown RBP14.62□□□□□ -0.07
PTPN13-203ENST00000427191 CBWD1Q9BRT8 395 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 TRIM2Q9C040 744 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 POLD4Q9HCU8 107 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 PRPF19Q9UMS4 504 aaKnown RBP14.62□□□□□ -0.07
PTPN13-203ENST00000427191 GIT1Q9Y2X7 761 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 PCDHB12Q9Y5F1 795 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 PCDHGB3Q9Y5G1 929 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 JCHAINP01591 159 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 FCGRTP55899 365 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 DGCR6LQ9BY27 220 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 GGA3Q9NZ52 723 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 BBIP1A8MTZ0 92 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 APOC4-APOC2K7ER74 178 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 GCATO75600 419 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 PGK1P00558 417 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 APOC2P02655 101 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 TGFB3P10600 412 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 FOXO4P98177 505 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 POU6F1Q14863 301 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 CTXN3Q4LDR2 81 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 ZNF470Q6ECI4 717 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 PIWIL2Q8TC59 973 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms