RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 FOXR1Q6PIV2 292 aa13.9□□□□□ -0.18
VEGFB-202ENST00000426086 Q6ZSR6 202 aa13.9□□□□□ -0.18
VEGFB-202ENST00000426086 SH2D3CQ8N5H7 860 aa13.9□□□□□ -0.18
VEGFB-202ENST00000426086 CHST14Q8NCH0 376 aa13.9□□□□□ -0.18
VEGFB-202ENST00000426086 ZNF548Q8NEK5 533 aaPredicted RBP13.9□□□□□ -0.18
VEGFB-202ENST00000426086 LMO3Q8TAP4 145 aa13.9□□□□□ -0.18
VEGFB-202ENST00000426086 PSMB7Q99436 277 aa13.9□□□□□ -0.18
VEGFB-202ENST00000426086 GOLPH3LQ9H4A5 285 aa13.9□□□□□ -0.18
VEGFB-202ENST00000426086 ST7Q9NRC1 585 aa13.9□□□□□ -0.18
VEGFB-202ENST00000426086 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.89□□□□□ -0.19
VEGFB-202ENST00000426086 FAM237AA0A1B0GTK4 181 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 TRIM49BA6NDI0 452 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 KPNA3O00505 521 aaPredicted RBP13.89□□□□□ -0.19
VEGFB-202ENST00000426086 ALOX15BO15296 676 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 SMAD6O43541 496 aaKnown RBP13.89□□□□□ -0.19
VEGFB-202ENST00000426086 SNAP91O60641 907 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 ALPPL2P10696 532 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 SRCP12931 536 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 TBXAS1P24557 533 aaPredicted RBP13.89□□□□□ -0.19
VEGFB-202ENST00000426086 RBMS1P29558 406 aaKnown RBP13.89□□□□□ -0.19
VEGFB-202ENST00000426086 AKT2P31751 481 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 PRCPP42785 496 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 NUCB2P80303 420 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 ZNF177Q13360 481 aaPredicted RBP13.89□□□□□ -0.19
VEGFB-202ENST00000426086 DEFB133Q30KQ1 61 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 ZSCAN23Q3MJ62 389 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 TMEM259Q4ZIN3 620 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 ANKRD40Q6AI12 368 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 ATL3Q6DD88 541 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 CCDC81Q6ZN84 652 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 KRBA2Q6ZNG9 492 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 EFL1Q7Z2Z2 1120 aaKnown RBP13.89□□□□□ -0.19
VEGFB-202ENST00000426086 C14orf80Q86SX3 495 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 LURAP1LQ8IV03 231 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 ARHGEF19Q8IW93 802 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 OR2A12Q8NGT7 310 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 CCDC47Q96A33 483 aaKnown RBP13.89□□□□□ -0.19
VEGFB-202ENST00000426086 SLC25A13Q9UJS0 675 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 CFAP45Q9UL16 551 aa13.89□□□□□ -0.19
VEGFB-202ENST00000426086 SYNJ2BP-COX16A0A087WUM0 186 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 E5RJQ4 531 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 SPINT1O43278 529 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 PCDH8O95206 1070 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 CHRNA3P32297 505 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 FMO5P49326 533 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 CSRP3P50461 194 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 DUSP3P51452 185 aaPredicted RBP13.88□□□□□ -0.19
VEGFB-202ENST00000426086 ARL13BQ3SXY8 428 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 NEK5Q6P3R8 708 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 BEND5Q7L4P6 421 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 RRAGAQ7L523 313 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 PTAR1Q7Z6K3 402 aaPredicted RBP13.88□□□□□ -0.19
VEGFB-202ENST00000426086 CLEC14AQ86T13 490 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 PPM1KQ8N3J5 372 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 ATP6V0D2Q8N8Y2 350 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 RPRD1AQ96P16 312 aaPredicted RBP13.88□□□□□ -0.19
VEGFB-202ENST00000426086 NT5C1BQ96P26 610 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 SLC4A5Q9BY07 1137 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 TCEAL2Q9H3H9 227 aaPredicted RBP13.88□□□□□ -0.19
VEGFB-202ENST00000426086 ACP6Q9NPH0 428 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 COX16Q9P0S2 106 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 IL17BQ9UHF5 180 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 VANGL2Q9ULK5 521 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 PNMA8BQ9ULN7 279 aaPredicted RBP13.88□□□□□ -0.19
VEGFB-202ENST00000426086 PCDHGA8Q9Y5G5 932 aa13.88□□□□□ -0.19
VEGFB-202ENST00000426086 EME2A4GXA9 379 aaPredicted RBP13.87□□□□□ -0.19
VEGFB-202ENST00000426086 NEMP2A6NFY4 417 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 A6NNZ2 444 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 TERTO14746 1132 aaKnown RBP13.87□□□□□ -0.19
VEGFB-202ENST00000426086 CNTN5O94779 1100 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 TNFSF15O95150 251 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 PAK4O96013 591 aaPredicted RBP13.87□□□□□ -0.19
VEGFB-202ENST00000426086 CSF2P04141 144 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 NME1P15531 152 aaKnown RBP13.87□□□□□ -0.19
VEGFB-202ENST00000426086 RRM1P23921 792 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 HNRNPKP61978 463 aaKnown RBP eCLIP13.87□□□□□ -0.19
VEGFB-202ENST00000426086 AUHQ13825 339 aaKnown RBP13.87□□□□□ -0.19
VEGFB-202ENST00000426086 STILQ15468 1287 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 TGIF1Q15583 401 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 ZCCHC8Q6NZY4 707 aaKnown RBP13.87□□□□□ -0.19
VEGFB-202ENST00000426086 LINGO4Q6UY18 593 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 RBFAQ8N0V3 343 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 IFT43Q96FT9 208 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 KREMEN1Q96MU8 473 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 DUSP23Q9BVJ7 150 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 TNKS2Q9H2K2 1166 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 USP29Q9HBJ7 922 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 POPDC2Q9HBU9 364 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 ANLNQ9NQW6 1124 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.87□□□□□ -0.19
VEGFB-202ENST00000426086 VPS28Q9UK41 221 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 HS3ST2Q9Y278 367 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 RP1P56715 2156 aa13.87□□□□□ -0.19
VEGFB-202ENST00000426086 MAST4O15021 2626 aa13.86□□□□□ -0.19
VEGFB-202ENST00000426086 SPTY2D1-AS1A0A0U1RR47 76 aa13.86□□□□□ -0.19
VEGFB-202ENST00000426086 I6L893 689 aaPredicted RBP13.86□□□□□ -0.19
VEGFB-202ENST00000426086 MUSKO15146 869 aa13.86□□□□□ -0.19
VEGFB-202ENST00000426086 SLC16A3O15427 465 aaKnown RBP13.86□□□□□ -0.19
VEGFB-202ENST00000426086 ITGB6P18564 788 aa13.86□□□□□ -0.19
VEGFB-202ENST00000426086 YWHAZP63104 245 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms