RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 MTG2Q9H4K7 406 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 PRSS16Q9NQE7 514 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 FARP1Q9Y4F1 1045 aaPredicted RBP25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 PCDHGA2Q9Y5H1 932 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 CCDC66A2RUB6 948 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 ZNF487B1APH4 448 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 RNASEH1O60930 286 aaKnown RBP25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 SIN3BO75182 1162 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 GABRG2P18507 467 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 ZNF662Q6ZS27 426 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 METTL3Q86U44 580 aaKnown RBP25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 CCDC50Q8IVM0 306 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 KATNAL2Q8IYT4 538 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 FAF2Q96CS3 445 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 RNF157Q96PX1 679 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 KLC2Q9H0B6 622 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 PRDM16Q9HAZ2 1276 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 MFHAS1Q9Y4C4 1052 aa25.93■■□□□ 1.74
TSPAN3-203ENST00000424443 CHD5Q8TDI0 1954 aa25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 BNIP3LO60238 219 aa25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 NDUFV2P19404 249 aa25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 CTNNA1P35221 906 aaKnown RBP25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 RECQLP46063 649 aaPredicted RBP25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 KIAA1324Q6UXG2 1013 aaKnown RBP25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 TMPRSS6Q8IU80 811 aa25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 ARHGAP12Q8IWW6 846 aa25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 RCOR2Q8IZ40 523 aa25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 FRS2Q8WU20 508 aa25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 PRCCQ92733 491 aaPredicted RBP25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 PTPRN2Q92932 1015 aa25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 RBM41Q96IZ5 413 aaKnown RBP25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 KCNF1Q9H3M0 494 aa25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 SP110Q9HB58 689 aa25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 CD248Q9HCU0 757 aa25.92■■□□□ 1.74
TSPAN3-203ENST00000424443 CKAP5Q14008 2032 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 K7ERQ8 282 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 ACADMP11310 421 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 USP39Q53GS9 565 aaKnown RBP25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 AFMIDQ63HM1 303 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 LEKR1Q6ZMV7 388 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 Q6ZVU0 165 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 RFX6Q8HWS3 928 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 NETO2Q8NC67 525 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 NELL1Q92832 810 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 SIPA1Q96FS4 1042 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 MRGPRX1Q96LB2 322 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 ALS2CR12Q96Q35 445 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 CEP44Q9C0F1 390 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 PCDHA3Q9Y5H8 950 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 CAPN6Q9Y6Q1 641 aa25.91■■□□□ 1.74
TSPAN3-203ENST00000424443 NUP205Q92621 2012 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 WDFY4Q6ZS81 3184 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 SMAD6O43541 496 aaKnown RBP25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 ZFXP17010 805 aaPredicted RBP25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 CTNNA2P26232 953 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 DNA2P51530 1060 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 COPAP53621 1224 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 BYSLQ13895 437 aaKnown RBP25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 PAFAH1B3Q15102 231 aaKnown RBP25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 C9orf64Q5T6V5 341 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 NCBP2-AS2Q69YL0 99 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 C22orf39Q6P5X5 142 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 MFSD7Q6UXD7 560 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 NT5DC3Q86UY8 548 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 UBL4BQ8N7F7 174 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 ZBTB44Q8NCP5 570 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 EXD1Q8NHP7 514 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 CASKIN2Q8WXE0 1202 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 OR8D1Q8WZ84 308 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 KRT35Q92764 455 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 MKRN2Q9H000 416 aaKnown RBP25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 SLC6A17Q9H1V8 727 aa25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 UBA2Q9UBT2 640 aaPredicted RBP25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 FCF1Q9Y324 198 aaKnown RBP25.9■■□□□ 1.74
TSPAN3-203ENST00000424443 C3orf70A6NLC5 250 aaPredicted RBP25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 MIF4GDA9UHW6 222 aaKnown RBP25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 APOL1O14791 398 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 ZSCAN12O43309 604 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 FTCDO95954 541 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 VAV1P15498 845 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 CNR2P34972 360 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 CETN2P41208 172 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 MARCKSL1P49006 195 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 RWDD2BP57060 319 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 ELAVL3Q14576 367 aaKnown RBP25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 ZNF776Q68DI1 518 aaPredicted RBP25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 DSG4Q86SJ6 1040 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 CACUL1Q86Y37 369 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 ATPAF2Q8N5M1 289 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 PCDH20Q8N6Y1 951 aaKnown RBP25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 IPO11Q9UI26 975 aaKnown RBP25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 ACTL7AQ9Y615 435 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 R4GN57 208 aa25.89■■□□□ 1.74
TSPAN3-203ENST00000424443 J3KR12 359 aa25.88■■□□□ 1.73
TSPAN3-203ENST00000424443 PRAMEF11O60813 436 aa25.88■■□□□ 1.73
TSPAN3-203ENST00000424443 INO80DQ53TQ3 878 aaPredicted RBP25.88■■□□□ 1.73
TSPAN3-203ENST00000424443 TFDP3Q5H9I0 405 aa25.88■■□□□ 1.73
TSPAN3-203ENST00000424443 SPOCD1Q6ZMY3 1216 aa25.88■■□□□ 1.73
TSPAN3-203ENST00000424443 STK40Q8N2I9 435 aa25.88■■□□□ 1.73
TSPAN3-203ENST00000424443 PQLC3Q8N755 202 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms