RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SFMBT2Q5VUG0 894 aa16.55■□□□□ 0.24
COL18A1-205ENST00000423214 OTUD1Q5VV17 481 aaPredicted RBP16.55■□□□□ 0.24
COL18A1-205ENST00000423214 C14orf80Q86SX3 495 aa16.55■□□□□ 0.24
COL18A1-205ENST00000423214 SPATS2Q86XZ4 545 aaKnown RBP16.55■□□□□ 0.24
COL18A1-205ENST00000423214 DCAF4L2Q8NA75 395 aa16.55■□□□□ 0.24
COL18A1-205ENST00000423214 TMEM35BQ8NCS4 154 aa16.55■□□□□ 0.24
COL18A1-205ENST00000423214 NPY6RQ99463 290 aa16.55■□□□□ 0.24
COL18A1-205ENST00000423214 ARHGEF38Q9NXL2 777 aa16.55■□□□□ 0.24
COL18A1-205ENST00000423214 VPS51Q9UID3 782 aa16.55■□□□□ 0.24
COL18A1-205ENST00000423214 FOXN3O00409 490 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-205ENST00000423214 SNAP91O60641 907 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 SDC3O75056 442 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 F9P00740 461 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 PRNPP04156 253 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 RRM1P23921 792 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 CHRNA3P32297 505 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 CLCN1P35523 988 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 ABCG1P45844 678 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 RECQLP46063 649 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-205ENST00000423214 CLCN6P51797 869 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 C5orf22Q49AR2 442 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 ALFQ53S48 1182 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 C22orf39Q6P5X5 142 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 TFAP2DQ7Z6R9 452 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 SETD3Q86TU7 594 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-205ENST00000423214 IRF2BP1Q8IU81 584 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 MLKLQ8NB16 471 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 MSANTD4Q8NCY6 345 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 KLHDC7BQ96G42 594 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 PPP1R16AQ96I34 528 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 PSMB7Q99436 277 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 AK5Q9Y6K8 562 aa16.54■□□□□ 0.24
COL18A1-205ENST00000423214 A0A087WV48 116 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 EIF4E1BA6NMX2 242 aaKnown RBP16.53■□□□□ 0.24
COL18A1-205ENST00000423214 SLC31A1O15431 190 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 CTSLP07711 333 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 THEGLP0DJG4 465 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 PRLRP16471 622 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 CKMT2P17540 419 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 TFE3P19532 575 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-205ENST00000423214 OR1E1P30953 314 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 AKT2P31751 481 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 CXCR3P49682 368 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 DAB2P98082 770 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 ILKQ13418 452 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 ACBD5Q5T8D3 534 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-205ENST00000423214 PIP5KL1Q5T9C9 394 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 FAM71AQ8IYT1 594 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 GRIN3AQ8TCU5 1115 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 TSC1Q92574 1164 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 KLK6Q92876 244 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 PGAP3Q96FM1 320 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-205ENST00000423214 TBCBQ99426 244 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 CALN1Q9BXU9 219 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 NDST4Q9H3R1 872 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 CLSTN2Q9H4D0 955 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 TMEM51Q9NW97 253 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 IL36AQ9UHA7 158 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 CA5BQ9Y2D0 317 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 SNX10Q9Y5X0 201 aa16.53■□□□□ 0.24
COL18A1-205ENST00000423214 A0A1W2PQU0 124 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 FAM170AA1A519 330 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 K7ERQ8 282 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 MT-CO1P00395 513 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 HNRNPA2B1P22626 353 aaKnown RBP16.52■□□□□ 0.24
COL18A1-205ENST00000423214 SCNN1AP37088 669 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 TAS2R38P59533 333 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 SEMG2Q02383 582 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 TARDBPQ13148 414 aaKnown RBP eCLIP16.52■□□□□ 0.24
COL18A1-205ENST00000423214 SLC25A52Q3SY17 297 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 TAF3Q5VWG9 929 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 NEK5Q6P3R8 708 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 FBXL19Q6PCT2 694 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 LINGO4Q6UY18 593 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 KANSL1Q7Z3B3 1105 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 HORMAD1Q86X24 394 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 ERICH1Q86X53 443 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 OR2A12Q8NGT7 310 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 ARRDC3Q96B67 414 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 C18orf8Q96DM3 657 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 TNKS2Q9H2K2 1166 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 FZD3Q9NPG1 666 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 MPP6Q9NZW5 540 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 DACH1Q9UI36 760 aa16.52■□□□□ 0.24
COL18A1-205ENST00000423214 ANKRD36A6QL64 1941 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 PTPRQQ9UMZ3 2332 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 A0A0D9SEW6 157 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 GOLGA8SH3BPF8 625 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 PCDH8O95206 1070 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 LSM8O95777 96 aaKnown RBP16.51■□□□□ 0.23
COL18A1-205ENST00000423214 CDH5P33151 784 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-205ENST00000423214 DRAP1Q14919 205 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-205ENST00000423214 VWA3BQ502W6 1294 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 SOWAHCQ53LP3 525 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-205ENST00000423214 HSP90AA4PQ58FG1 418 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 LRRC69Q6ZNQ3 347 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 XYLT1Q86Y38 959 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 TMEM145Q8NBT3 493 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 CHST14Q8NCH0 376 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 TMIEQ8NEW7 156 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms