RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ETF1P62495 437 aaKnown RBP17.35■□□□□ 0.37
COL7A1-202ENST00000422991 KLF1Q13351 362 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-202ENST00000422991 ENPP2Q13822 863 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 HSF5Q4G112 596 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-202ENST00000422991 FNDC3BQ53EP0 1204 aaKnown RBP17.35■□□□□ 0.37
COL7A1-202ENST00000422991 RETSATQ6NUM9 610 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 PKN3Q6P5Z2 889 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 LINGO4Q6UY18 593 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 TRMT11Q7Z4G4 463 aaKnown RBP17.35■□□□□ 0.37
COL7A1-202ENST00000422991 LRRC49Q8IUZ0 686 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 CCDC33Q8N5R6 958 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 KDM1BQ8NB78 822 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 RPL10LQ96L21 214 aaKnown RBP17.35■□□□□ 0.37
COL7A1-202ENST00000422991 NAPGQ99747 312 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-202ENST00000422991 CACNA2D2Q9NY47 1150 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 DLGAP2Q9P1A6 1054 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 IPO11Q9UI26 975 aaKnown RBP17.35■□□□□ 0.37
COL7A1-202ENST00000422991 SNX12Q9UMY4 172 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 PLA2G4CQ9UP65 541 aa17.35■□□□□ 0.37
COL7A1-202ENST00000422991 CTAGE9A4FU28 777 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 CHURC1-FNTBB4DL54 471 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 J3KR12 359 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 PI15O43692 258 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 CD160O95971 181 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 MT-CO1P00395 513 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 SRCP12931 536 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 MX2P20592 715 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 IL12RB1P42701 662 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 MAGEA9P43362 315 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 NR2C2P49116 596 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 SERPINH1P50454 418 aaKnown RBP17.34■□□□□ 0.37
COL7A1-202ENST00000422991 GEMIN4P57678 1058 aaKnown RBP17.34■□□□□ 0.37
COL7A1-202ENST00000422991 GAS6Q14393 721 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 SERPINA13PQ6UXR4 307 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 ZSCAN30Q86W11 494 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 SLC13A5Q86YT5 568 aaPredicted RBP17.34■□□□□ 0.37
COL7A1-202ENST00000422991 CHPFQ8IZ52 775 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 SH2D3CQ8N5H7 860 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 HAUS1Q96CS2 278 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 HDAC11Q96DB2 347 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 PBKQ96KB5 322 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 C16orf45Q96MC5 204 aaPredicted RBP17.34■□□□□ 0.37
COL7A1-202ENST00000422991 OSBPL9Q96SU4 736 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 IER2Q9BTL4 223 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 TMEM245Q9H330 911 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 SP110Q9HB58 689 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 SAE1Q9UBE0 346 aaPredicted RBP17.34■□□□□ 0.37
COL7A1-202ENST00000422991 SLCO3A1Q9UIG8 710 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 STON1Q9Y6Q2 735 aa17.34■□□□□ 0.37
COL7A1-202ENST00000422991 TCRBV7S2A1N4TA0A589 114 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 ATP9BO43861 1147 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 CEP104O60308 925 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 MAFKO60675 156 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 ADAM23O75077 832 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 PRKCHP24723 683 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 NTSR1P30989 418 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 NUBP1P53384 320 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 ST8SIA6P61647 398 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 IL10RBQ08334 325 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 SLC20A2Q08357 652 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 PDK1Q15118 436 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 NOMO1Q15155 1222 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 CCDC181Q5TID7 509 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 PAPD7Q5XG87 772 aaKnown RBP17.33■□□□□ 0.36
COL7A1-202ENST00000422991 LEKR1Q6ZMV7 388 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 BZW1Q7L1Q6 419 aaKnown RBP17.33■□□□□ 0.36
COL7A1-202ENST00000422991 TXNDC5Q8NBS9 432 aaKnown RBP17.33■□□□□ 0.36
COL7A1-202ENST00000422991 P3H4Q92791 437 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 TSGA13Q96PP4 275 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 GABRG3Q99928 467 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 UBA2Q9UBT2 640 aaPredicted RBP17.33■□□□□ 0.36
COL7A1-202ENST00000422991 MMP17Q9ULZ9 603 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 ACTL7AQ9Y615 435 aa17.33■□□□□ 0.36
COL7A1-202ENST00000422991 TTC34A8MYJ7 566 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 K7ERQ8 282 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 SGK1O00141 431 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 CES2O00748 559 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 PPP1R12AO14974 1030 aaPredicted RBP17.32■□□□□ 0.36
COL7A1-202ENST00000422991 SMAD6O43541 496 aaKnown RBP17.32■□□□□ 0.36
COL7A1-202ENST00000422991 DEKP35659 375 aaKnown RBP17.32■□□□□ 0.36
COL7A1-202ENST00000422991 WASP42768 502 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 CLCN6P51797 869 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 OTUD4Q01804 1114 aaKnown RBP17.32■□□□□ 0.36
COL7A1-202ENST00000422991 PPIDQ08752 370 aaKnown RBP17.32■□□□□ 0.36
COL7A1-202ENST00000422991 RASGEF1CQ8N431 466 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 ATP11CQ8NB49 1132 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 ACTL9Q8TC94 416 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 COG1Q8WTW3 980 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 FRS2Q8WU20 508 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 CASKIN2Q8WXE0 1202 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 FATE1Q969F0 183 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 ZNF599Q96NL3 588 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 LGMNQ99538 433 aa17.32■□□□□ 0.36
COL7A1-202ENST00000422991 WASH3PC4AMC7 463 aa17.31■□□□□ 0.36
COL7A1-202ENST00000422991 ATG13O75143 517 aa17.31■□□□□ 0.36
COL7A1-202ENST00000422991 TMCC1O94876 653 aa17.31■□□□□ 0.36
COL7A1-202ENST00000422991 PEX11BO96011 259 aa17.31■□□□□ 0.36
COL7A1-202ENST00000422991 FGGP02679 453 aa17.31■□□□□ 0.36
COL7A1-202ENST00000422991 HLA-EP13747 358 aa17.31■□□□□ 0.36
COL7A1-202ENST00000422991 TCP1P17987 556 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms