RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 KATNAL2Q8IYT4 538 aa12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 RNF10Q8N5U6 811 aaKnown RBP12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 ATP11CQ8NB49 1132 aa12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 FRS2Q8WU20 508 aa12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 RNF157Q96PX1 679 aa12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 MKRN2Q9H000 416 aaKnown RBP12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 CD93Q9NPY3 652 aa12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 PRSS16Q9NQE7 514 aa12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 TRMT1Q9NXH9 659 aaKnown RBP12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 DDX56Q9NY93 547 aaKnown RBP12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 AMFRQ9UKV5 643 aa12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 HS3ST2Q9Y278 367 aa12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 FCF1Q9Y324 198 aaKnown RBP12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 ANKRD36A6QL64 1941 aa12.95□□□□□ -0.34
AC004540.1-205ENST00000420774 PLXND1Q9Y4D7 1925 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 USP27XA6NNY8 438 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 KDELR3O43731 214 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 ATP9BO43861 1147 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 BNIP3LO60238 219 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 SYNCRIPO60506 623 aaKnown RBP12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 ZNF821O75541 412 aaPredicted RBP12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 APBB3O95704 486 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 NDUFV2P19404 249 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 CTNNA2P26232 953 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 ETFBP38117 255 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 CDKN2BP42772 138 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 SERPINH1P50454 418 aaKnown RBP12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 PEX5P50542 639 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 DGKEP52429 567 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 COPAP53621 1224 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 DYNLT1P63172 113 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 STARD3Q14849 445 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 DLG2Q15700 870 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 ODF2Q5BJF6 829 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 C9orf64Q5T6V5 341 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 KAZNQ674X7 775 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 C22orf39Q6P5X5 142 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 NPNTQ6UXI9 565 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 SPOCD1Q6ZMY3 1216 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 RFX6Q8HWS3 928 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 CCDC50Q8IVM0 306 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 REXO1L1PQ8IX06 675 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 SYCE1Q8N0S2 351 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 PLD5Q8N7P1 536 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 PTPRN2Q92932 1015 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 HERPUD2Q9BSE4 406 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 TNKS2Q9H2K2 1166 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 PDFQ9HBH1 243 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 POLMQ9NP87 494 aaPredicted RBP12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 BCCIPQ9P287 314 aaKnown RBP eCLIP12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 FBXO4Q9UKT5 387 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 PCDHA3Q9Y5H8 950 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 CEP192Q8TEP8 1941 aa12.94□□□□□ -0.34
AC004540.1-205ENST00000420774 EDDM13A0A1B0GTR0 161 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 ARHGAP42A6NI28 874 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 DDX3YO15523 660 aaKnown RBP12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 NNMTP40261 264 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 NUBP1P53384 320 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 SLC10A2Q12908 348 aaPredicted RBP12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 SRSF5Q13243 272 aaKnown RBP12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 ZNF211Q13398 564 aaPredicted RBP12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 CAMK2GQ13555 558 aaPredicted RBP12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 PAFAH1B3Q15102 231 aaKnown RBP12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 TAZQ16635 292 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 FAM182AQ5T1J6 154 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 DCAF12L1Q5VU92 463 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 SLC9A4Q6AI14 798 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 RETSATQ6NUM9 610 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 RASSF3Q86WH2 238 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 STK40Q8N2I9 435 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 PGBD3Q8N328 593 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 CAMKK1Q8N5S9 505 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 FRMD1Q8N878 549 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 KDM1BQ8NB78 822 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 EXD1Q8NHP7 514 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 MRGPRX1Q96LB2 322 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 FAM86C1Q9NVL1 165 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 DONSONQ9NYP3 566 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 HPCAL4Q9UM19 191 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 INVSQ9Y283 1065 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 CACNA1HO95180 2353 aa12.93□□□□□ -0.34
AC004540.1-205ENST00000420774 NUMA1Q14980 2115 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 hCG_1818297A0A087WSY0 165 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 CCDC66A2RUB6 948 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 RNF103O00237 685 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 APOL1O14791 398 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 PRAMEF11O60813 436 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 TMCC1O94876 653 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 ZRANB2O95218 330 aaKnown RBP eCLIP12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 PYGMP11217 842 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 SERPINB6P35237 376 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 METAP1P53582 386 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 RWDD2BP57060 319 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 E2F5Q15329 346 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 TFDP3Q5H9I0 405 aa12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 KIAA1324Q6UXG2 1013 aaKnown RBP12.92□□□□□ -0.34
AC004540.1-205ENST00000420774 B4GALNT4Q76KP1 1039 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms