RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CPT1BQ92523 772 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 EXOC4Q96A65 974 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 ACDQ96AP0 544 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 LRRC3BQ96PB8 259 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 FAM83CQ9BQN1 747 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 FEM1AQ9BSK4 669 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 SMG9Q9H0W8 520 aaKnown RBP14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 C10orf88Q9H8K7 445 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 ZFP14Q9HCL3 533 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 ARFGAP3Q9NP61 516 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 KIAA1522Q9P206 1035 aaPredicted RBP14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 MTRF1LQ9UGC7 380 aaKnown RBP14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 ATP8A1Q9Y2Q0 1164 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 CHD5Q8TDI0 1954 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 DFFAO00273 331 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 EIF3HO15372 352 aaKnown RBP eCLIP14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 ATP8B1O43520 1251 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 PPFIA2O75334 1257 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 ZMPSTE24O75844 475 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 SUN1O94901 812 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 RHOCP08134 193 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 LAMP2P13473 410 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 ETS1P14921 441 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 CES1P23141 567 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 ITGA8P53708 1063 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 GEMIN4P57678 1058 aaKnown RBP14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 ZP2Q05996 745 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 SLC20A2Q08357 652 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 EML3Q32P44 896 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 FBXO38Q6PIJ6 1188 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 ARHGEF18Q6ZSZ5 1173 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 CIR1Q86X95 450 aaPredicted RBP14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 CCDC117Q8IWD4 279 aaPredicted RBP14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 CNTD1Q8N815 330 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 DCAF4L2Q8NA75 395 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 DEPDC1BQ8WUY9 529 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 NSMCE1Q8WV22 266 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 IFT81Q8WYA0 676 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 RSPRY1Q96DX4 576 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 PKNOX2Q96KN3 472 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 FCRL5Q96RD9 977 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 FMO2Q99518 471 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 TXLNGYQ9BZA5 131 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 GBA3Q9H227 469 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 DPH5Q9H2P9 285 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 THG1LQ9NWX6 298 aaKnown RBP14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 ANAPC5Q9UJX4 755 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 HPCAL4Q9UM19 191 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 NFU1Q9UMS0 254 aa14.55□□□□□ -0.08
SHMT1P1-201ENST00000419974 C2orf16Q68DN1 1984 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 HEPACAM2A8MVW5 462 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 ANHXE9PGG2 379 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 H0Y626 953 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 KCNK1O00180 336 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 AP3B1O00203 1094 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 PSMD3O43242 534 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 TSPAN3O60637 253 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 METTL18O95568 372 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 MLNP12872 115 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 HSPA9P38646 679 aaKnown RBP14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 PLTPP55058 493 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 CDH18Q13634 790 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 SLMAPQ14BN4 828 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 TRIP13Q15645 432 aaPredicted RBP14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 RALGPS1Q5JS13 557 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 MARC1Q5VT66 337 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 IZUMO3Q5VZ72 239 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 KCTD11Q693B1 232 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 PPP1R21Q6ZMI0 780 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 ARHGAP36Q6ZRI8 547 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 MTSS1LQ765P7 747 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 GET4Q7L5D6 327 aaPredicted RBP14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 OTOP3Q7RTS5 596 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 TMEM25Q86YD3 366 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 MFN1Q8IWA4 741 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 OR52K2Q8NGK3 314 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 CCDC110Q8TBZ0 833 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 PRCCQ92733 491 aaPredicted RBP14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 ATP2A3Q93084 1043 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 TADA1Q96BN2 335 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 PSKH2Q96QS6 385 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 C2orf49Q9BVC5 232 aaPredicted RBP14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 RAB6BQ9NRW1 208 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 DUS2Q9NX74 493 aaKnown RBP14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 SLC27A6Q9Y2P4 619 aa14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 AAR2Q9Y312 384 aaKnown RBP14.54□□□□□ -0.08
SHMT1P1-201ENST00000419974 A0A0D9SEW6 157 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 E7ESA3 106 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 TRDMT1O14717 391 aaKnown RBP14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 GPR37L1O60883 481 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 NFATC1O95644 943 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 ADH1CP00326 375 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 ALADP13716 330 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 CD68P34810 354 aaPredicted RBP14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 ACVRL1P37023 503 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 GAD2Q05329 585 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 NSUN2Q08J23 767 aaKnown RBP eCLIP14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 ZBTB17Q13105 803 aa14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 HLTFQ14527 1009 aaKnown RBP eCLIP14.53□□□□□ -0.08
SHMT1P1-201ENST00000419974 DHCR24Q15392 516 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms