RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 ATAT1Q5SQI0 421 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 FNBP1LQ5T0N5 605 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 RNF219Q5W0B1 726 aaPredicted RBP14.06□□□□□ -0.16
CHMP5-202ENST00000419016 TPGS1Q6ZTW0 290 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 IQCKQ8N0W5 287 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 CARNMT1Q8N4J0 409 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 IRF7Q92985 503 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 VIPAS39Q9H9C1 493 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 SP110Q9HB58 689 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 GLOD4Q9HC38 313 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 RBM22Q9NW64 420 aaKnown RBP eCLIP14.06□□□□□ -0.16
CHMP5-202ENST00000419016 OBP2AQ9NY56 170 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 MARK1Q9P0L2 795 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 CDH7Q9ULB5 785 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 XIRP2A4UGR9 3374 aa14.06□□□□□ -0.16
CHMP5-202ENST00000419016 H0Y626 953 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 SOX1O00570 391 aaPredicted RBP14.05□□□□□ -0.16
CHMP5-202ENST00000419016 SLC9A3R1O14745 358 aaPredicted RBP14.05□□□□□ -0.16
CHMP5-202ENST00000419016 HLA-DQB2P05538 268 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 NFKB1P19838 968 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 HSD17B3P37058 310 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 ETFBP38117 255 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 MAGEA3P43357 314 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 MSS51Q4VC12 460 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 ITPRIPL1Q6GPH6 555 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 ZNF534Q76KX8 674 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 GET4Q7L5D6 327 aaPredicted RBP14.05□□□□□ -0.16
CHMP5-202ENST00000419016 OTOP3Q7RTS5 596 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 CAND1Q86VP6 1230 aaKnown RBP14.05□□□□□ -0.16
CHMP5-202ENST00000419016 USP33Q8TEY7 942 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 FCRL5Q96RD9 977 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 RBM15Q96T37 977 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHMP5-202ENST00000419016 MLPHQ9BV36 600 aaPredicted RBP14.05□□□□□ -0.16
CHMP5-202ENST00000419016 FRMD8Q9BZ67 464 aaPredicted RBP14.05□□□□□ -0.16
CHMP5-202ENST00000419016 SEMA4AQ9H3S1 761 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 SPHK2Q9NRA0 654 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 PLK2Q9NYY3 685 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 HPCAL4Q9UM19 191 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 WNT6Q9Y6F9 365 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 C5orf42Q9H799 3197 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 MYO18AQ92614 2054 aaKnown RBP14.05□□□□□ -0.16
CHMP5-202ENST00000419016 GOLGA8MH3BSY2 632 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 ALOX15BO15296 676 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 SUN1O94901 812 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 CD160O95971 181 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 CYBBP04839 570 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 GLDCP23378 1020 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 PLK1P53350 603 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 PMS2P54278 862 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 SYCP2LQ5T4T6 812 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 MARC1Q5VT66 337 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 IL31Q6EBC2 164 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 CES5AQ6NT32 575 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 MFN1Q8IWA4 741 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 BHMTQ93088 406 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 PABPC5Q96DU9 382 aaKnown RBP14.05□□□□□ -0.16
CHMP5-202ENST00000419016 OXNAD1Q96HP4 312 aaPredicted RBP14.05□□□□□ -0.16
CHMP5-202ENST00000419016 SERPINB12Q96P63 405 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 MYADMQ96S97 322 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 SPON2Q9BUD6 331 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 PABPC3Q9H361 631 aaKnown RBP14.05□□□□□ -0.16
CHMP5-202ENST00000419016 ATP13A1Q9HD20 1204 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 RSPH14Q9UHP6 348 aa14.05□□□□□ -0.16
CHMP5-202ENST00000419016 EIF3HO15372 352 aaKnown RBP eCLIP14.04□□□□□ -0.16
CHMP5-202ENST00000419016 AP2A1O95782 977 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 CSKP41240 450 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 OXCT1P55809 520 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 ARF5P84085 180 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 CDH18Q13634 790 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 LBRQ14739 615 aaKnown RBP14.04□□□□□ -0.16
CHMP5-202ENST00000419016 HIF1AQ16665 826 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 EML3Q32P44 896 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 LY6G5CQ5SRR4 150 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 UBAP2Q5T6F2 1119 aaKnown RBP14.04□□□□□ -0.16
CHMP5-202ENST00000419016 TMCO4Q5TGY1 634 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 ALG1LQ6GMV1 187 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 CEP128Q6ZU80 1094 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 TRMT10CQ7L0Y3 403 aaKnown RBP14.04□□□□□ -0.16
CHMP5-202ENST00000419016 CCDC25Q86WR0 208 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 AGGF1Q8N302 714 aaeCLIP14.04□□□□□ -0.16
CHMP5-202ENST00000419016 PGBD5Q8N414 524 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 PDCD7Q8N8D1 485 aaKnown RBP14.04□□□□□ -0.16
CHMP5-202ENST00000419016 BPIFB1Q8TDL5 484 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 OSCP1Q8WVF1 389 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 TADA1Q96BN2 335 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 ASIC4Q96FT7 647 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 WDR83Q9BRX9 315 aaKnown RBP14.04□□□□□ -0.16
CHMP5-202ENST00000419016 DNAJC17Q9NVM6 304 aaKnown RBP14.04□□□□□ -0.16
CHMP5-202ENST00000419016 CLDND1Q9NY35 253 aa14.04□□□□□ -0.16
CHMP5-202ENST00000419016 ERI2A8K979 691 aaKnown RBP14.03□□□□□ -0.16
CHMP5-202ENST00000419016 F5H423 210 aaPredicted RBP14.03□□□□□ -0.16
CHMP5-202ENST00000419016 GRIA1P42261 906 aa14.03□□□□□ -0.16
CHMP5-202ENST00000419016 MMP13P45452 471 aa14.03□□□□□ -0.16
CHMP5-202ENST00000419016 ARL4CP56559 192 aa14.03□□□□□ -0.16
CHMP5-202ENST00000419016 LMAN2Q12907 356 aa14.03□□□□□ -0.16
CHMP5-202ENST00000419016 IHHQ14623 411 aa14.03□□□□□ -0.16
CHMP5-202ENST00000419016 RFTN1Q14699 578 aaPredicted RBP14.03□□□□□ -0.16
CHMP5-202ENST00000419016 ASTLQ6HA08 431 aaPredicted RBP14.03□□□□□ -0.16
CHMP5-202ENST00000419016 PPP1R21Q6ZMI0 780 aa14.03□□□□□ -0.16
CHMP5-202ENST00000419016 DCAF4L2Q8NA75 395 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms