RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PIGNO95427 931 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 RAG1P15918 1043 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 LRPAP1P30533 357 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 PRKAA2P54646 552 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 SCAPQ12770 1279 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 ZBTB17Q13105 803 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 MMEL1Q495T6 779 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 SLC9B1Q4ZJI4 515 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 LDLRAD1Q5T700 205 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 EPGNQ6UW88 154 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 PAQR9Q6ZVX9 377 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 SETD3Q86TU7 594 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 KBTBD2Q8IY47 623 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 AFAP1L2Q8N4X5 818 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 NPWQ8N729 165 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 KYQ8NBH2 561 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 ARRDC4Q8NCT1 418 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 LENG1Q96BZ8 264 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 LENG8Q96PV6 779 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 DDX50Q9BQ39 737 aaKnown RBP11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 SGIP1Q9BQI5 828 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 NUF2Q9BZD4 464 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 RHOJQ9H4E5 214 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 WDR55Q9H6Y2 383 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 CRTAC1Q9NQ79 661 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 SNX10Q9Y5X0 201 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 SLCO1B7G3V0H7 640 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 CABYRO75952 493 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 VAPBO95292 243 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 STMN1P16949 149 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 YY1P25490 414 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 NMBRP28336 390 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 EPHA3P29320 983 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 TUBP50607 506 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 GRM3Q14832 879 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 TMC7Q7Z402 723 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 MAVSQ7Z434 540 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 SNX32Q86XE0 403 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 RDH11Q8TC12 318 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 GDPD5Q8WTR4 605 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 RTKNQ9BST9 563 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 TRIM62Q9BVG3 475 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 OXCT2Q9BYC2 517 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 WDR6Q9NNW5 1121 aaKnown RBP11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 PAPOLBQ9NRJ5 636 aaKnown RBP11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 PTCH2Q9Y6C5 1203 aa11.9□□□□□ -0.5
CSPG4P3Y-201ENST00000418188 LYNP07948 512 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 ITGAXP20702 1163 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 MPSTP25325 297 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 CRABP2P29373 138 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 PRDX6P30041 224 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 BEX3Q00994 111 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 GALNT2Q10471 571 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 CYLC2Q14093 348 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 UBXN11Q5T124 520 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 KDELC2Q7Z4H8 507 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 ZNF354CQ86Y25 554 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 NPLOC4Q8TAT6 608 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 LRGUKQ96M69 825 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 SMOQ99835 787 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 CENPKQ9BS16 269 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 OXSMQ9NWU1 459 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 CDH9Q9ULB4 789 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 RGSL1A5PLK6 1076 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 CASTOR2A6NHX0 329 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 FAM163BP0C2L3 166 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 ENO3P13929 434 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 ALOX15P16050 662 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 PDCD2Q16342 344 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 PCID2Q5JVF3 399 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 DCLRE1AQ6PJP8 1040 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 OTOP3Q7RTS5 596 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 CTU1Q7Z7A3 348 aaKnown RBP11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 MLPHQ9BV36 600 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 TRIM4Q9C037 500 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 ACSS2Q9NR19 701 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 FIS1Q9Y3D6 152 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 PTGESO14684 152 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 PMPCBO75439 489 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 CHRNGP07510 517 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 CLCNKBP51801 687 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 FAM110CQ1W6H9 321 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 XKR4Q5GH76 650 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 ARL13AQ5H913 290 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 NAPRTQ6XQN6 538 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 KCTD4Q8WVF5 259 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 BRI3BPQ8WY22 251 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 ELMO2Q96JJ3 720 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 OR52B2Q96RD2 323 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 Q9H521 79 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 GTSE1Q9NYZ3 720 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 VTI1BQ9UEU0 232 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 SLC45A1Q9Y2W3 748 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 LRRC37A2A6NM11 1700 aa11.89□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 G3V2L1 256 aa11.88□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 GABRDO14764 452 aa11.88□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 ADCY6O43306 1168 aa11.88□□□□□ -0.51
CSPG4P3Y-201ENST00000418188 B3GAT3O94766 335 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms