RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 CHMP2AO43633 222 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 RPN1P04843 607 aaKnown RBP4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 KRT18P05783 430 aaKnown RBP4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 MYL1P05976 194 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 TPM3P06753 285 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 CYP3A4P08684 503 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 PRR35P0CG20 571 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 MYCLP12524 364 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 CYP3A7P24462 503 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 CDC25AP30304 524 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 CIITAP33076 1130 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 COPB2P35606 906 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC11A2P49281 568 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 HSD17B4P51659 736 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 IGBP1P78318 339 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 CYP4F2P78329 520 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 MYL5Q02045 173 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 COG2Q14746 738 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 IL17AQ16552 155 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 Q4G0T1 1027 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 ARHGEF16Q5VV41 709 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZNF626Q68DY1 528 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 KLHL10Q6JEL2 608 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZNF783Q6ZMS7 281 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 CATSPERGQ6ZRH7 1159 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 YTHDF3Q7Z739 585 aaKnown RBP4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZNF280BQ86YH2 543 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 TPH2Q8IWU9 490 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC15A3Q8IY34 581 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 MPP5Q8N3R9 675 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC15A4Q8N697 577 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 DNAJC5GQ8N7S2 189 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 PNLDC1Q8NA58 520 aaKnown RBP4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 MLKLQ8NB16 471 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 PPP1R35Q8TAP8 253 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 NEK9Q8TD19 979 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 REPS1Q96D71 796 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 CLMNQ96JQ2 1002 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 FAM20AQ96MK3 541 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 CCDC43Q96MW1 224 aaKnown RBP4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 MBOAT7Q96N66 472 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 GSDMAQ96QA5 445 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 MTMR9Q96QG7 549 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 PPP1R9BQ96SB3 815 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 MPHOSPH6Q99547 160 aaKnown RBP4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 MACROD1Q9BQ69 325 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 BPIFA3Q9BQP9 254 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZNF577Q9BSK1 485 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 PAGR1Q9BTK6 254 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 DPCDQ9BVM2 203 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 TEKT3Q9BXF9 490 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 TEX13BQ9BXU2 312 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 RHOBTB2Q9BYZ6 727 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 TRIM5Q9C035 493 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 BLZF1Q9H2G9 400 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 NMRK2Q9NPI5 230 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 HOXC10Q9NYD6 342 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 MAP3K20Q9NYL2 800 aaKnown RBP4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 FLRT1Q9NZU1 646 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 ADAMTS5Q9UNA0 930 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 AGTPBP1Q9UPW5 1226 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 SH2B3Q9UQQ2 575 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 PFASO15067 1338 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZNF236Q9UL36 1845 aa4.14□□□□□ -1.75
HMGB3P20-201ENST00000417997 A0A1W2PPL8 197 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 TISP43B9A030 160 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 FAM86B1E9PN63 330 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 DDX39AO00148 427 aaKnown RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 CXCL11O14625 94 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 PSMA7O14818 248 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 IKBKBO14920 756 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 MSH4O15457 936 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 UBXN7O94888 489 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 ADCY5O95622 1261 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 SERPINC1P01008 464 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 TPM2P07951 284 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 PDGFRBP09619 1106 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 FAM86B2P0C5J1 330 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 NHLRC4P0CG21 123 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 KITP10721 976 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 IDEP14735 1019 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 KELP23276 732 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 MSNP26038 577 aaKnown RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 ADORA2AP29274 412 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 EPHB2P29323 1055 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 CASP1P29466 404 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 CCND2P30279 289 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 LRPAP1P30533 357 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 PPP1R2P41236 205 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 RAB27AP51159 221 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 PDE6CP51160 858 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 PRKAG1P54619 331 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 RPS6P62753 249 aaKnown RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 TUBA4AP68366 448 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 MCL1Q07820 350 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 MYO1EQ12965 1108 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 CUL4BQ13620 913 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 MORC3Q14149 939 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 PDIA5Q14554 519 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 KCNB1Q14721 858 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 267.9 ms