RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 FAM102AQ5T9C2 384 aaPredicted RBP18.49■□□□□ 0.55
VCP-202ENST00000417448 BROXQ5VW32 411 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 HGSNATQ68CP4 663 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 SPECC1LQ69YQ0 1117 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 TRNP1Q6NT89 227 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 MSANTD2Q6P1R3 559 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 SARM1Q6SZW1 724 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 USP30Q70CQ3 517 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 KIAA0907Q7Z7F0 614 aaPredicted RBP18.49■□□□□ 0.55
VCP-202ENST00000417448 TAC4Q86UU9 113 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 SNRNP27Q8WVK2 155 aaKnown RBP18.49■□□□□ 0.55
VCP-202ENST00000417448 MED8Q96G25 268 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 CDK5RAP1Q96SZ6 601 aaKnown RBP18.49■□□□□ 0.55
VCP-202ENST00000417448 POPDC2Q9HBU9 364 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 OLA1Q9NTK5 396 aaKnown RBP18.49■□□□□ 0.55
VCP-202ENST00000417448 FBXL12Q9NXK8 326 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 ADAMTS1Q9UHI8 967 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 ITIH6Q6UXX5 1313 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 GOLGA6L7A0A1B0GV03 622 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 DDX3XO00571 662 aaKnown RBP eCLIP18.48■□□□□ 0.55
VCP-202ENST00000417448 MT-CO3P00414 261 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 CCDC172P0C7W6 258 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 MMP8P22894 467 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 RXRGP48443 463 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 ARRB1P49407 418 aaPredicted RBP18.48■□□□□ 0.55
VCP-202ENST00000417448 ZNF75DP51815 510 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 TDRD12Q587J7 1177 aaKnown RBP18.48■□□□□ 0.55
VCP-202ENST00000417448 EFHC1Q5JVL4 640 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 TRIM72Q6ZMU5 477 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 SPATS2Q86XZ4 545 aaKnown RBP18.48■□□□□ 0.55
VCP-202ENST00000417448 EMC1Q8N766 993 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.48■□□□□ 0.559e-6■■■□□ 15.9
VCP-202ENST00000417448 ZNF397Q8NF99 534 aaPredicted RBP18.48■□□□□ 0.55
VCP-202ENST00000417448 WFDC5Q8TCV5 224 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 WFIKKN2Q8TEU8 576 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 SKA1Q96BD8 255 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 MYO19Q96H55 970 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 ZNF578Q96N58 590 aaPredicted RBP18.48■□□□□ 0.55
VCP-202ENST00000417448 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.48■□□□□ 0.55
VCP-202ENST00000417448 METTL5Q9NRN9 209 aaKnown RBP18.48■□□□□ 0.55
VCP-202ENST00000417448 ADAM22Q9P0K1 906 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 GGA2Q9UJY4 613 aa18.48■□□□□ 0.55
VCP-202ENST00000417448 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.48■□□□□ 0.55
VCP-202ENST00000417448 COL27A1Q8IZC6 1860 aaPredicted RBP18.48■□□□□ 0.55
VCP-202ENST00000417448 TEX15Q9BXT5 2789 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 A0A1W2PP55 124 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 SART1O43290 800 aaKnown RBP18.47■□□□□ 0.55
VCP-202ENST00000417448 TRUB2O95900 331 aaKnown RBP18.47■□□□□ 0.55
VCP-202ENST00000417448 DLDP09622 509 aaKnown RBP18.47■□□□□ 0.55
VCP-202ENST00000417448 PRKCIP41743 596 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 NSFP46459 744 aaKnown RBP18.47■□□□□ 0.55
VCP-202ENST00000417448 SGSHP51688 502 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 TBX4P57082 545 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 CENPCQ03188 943 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 TRIP4Q15650 581 aaPredicted RBP18.47■□□□□ 0.55
VCP-202ENST00000417448 MPPE1Q53F39 396 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 RAB6CQ53S08 254 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 MBLAC2Q68D91 279 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 ACAD10Q6JQN1 1059 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 JOSD2Q8TAC2 188 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 GANCQ8TET4 914 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 KCNE4Q8WWG9 221 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 SLC2A13Q96QE2 648 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 RAB6CQ9H0N0 254 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 NEUROG2Q9H2A3 272 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 NCKAP1Q9Y2A7 1128 aa18.47■□□□□ 0.55
VCP-202ENST00000417448 TLR4O00206 839 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 TRIM38O00635 465 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 MID1O15344 667 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 KLK10O43240 276 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 ATMINO43313 823 aaPredicted RBP18.46■□□□□ 0.55
VCP-202ENST00000417448 HSF2BPO75031 334 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 DAB1O75553 588 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 PABPC1P11940 636 aaKnown RBP18.46■□□□□ 0.55
VCP-202ENST00000417448 FLT3P36888 993 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 CSRP3P50461 194 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 SNX16P57768 344 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 GABREP78334 506 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 VAC14Q08AM6 782 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 ZC3H12AQ5D1E8 599 aaKnown RBP18.46■□□□□ 0.55
VCP-202ENST00000417448 SLC26A9Q7LBE3 791 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 AHI1Q8N157 1196 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 OR2T34Q8NGX1 318 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 FCRL2Q96LA5 508 aaPredicted RBP18.46■□□□□ 0.55
VCP-202ENST00000417448 TRIM4Q9C037 500 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 FAM204AQ9H8W3 233 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 ERVMER34-1Q9H9K5 563 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 XPO7Q9UIA9 1087 aaKnown RBP18.46■□□□□ 0.55
VCP-202ENST00000417448 SSUH2Q9Y2M2 353 aa18.46■□□□□ 0.55
VCP-202ENST00000417448 HBS1LQ9Y450 684 aaKnown RBP18.46■□□□□ 0.55
VCP-202ENST00000417448 TDRD6O60522 2096 aaKnown RBP18.45■□□□□ 0.54
VCP-202ENST00000417448 SDC3O75056 442 aa18.45■□□□□ 0.54
VCP-202ENST00000417448 SIN3BO75182 1162 aa18.45■□□□□ 0.54
VCP-202ENST00000417448 DXOO77932 396 aaKnown RBP18.45■□□□□ 0.54
VCP-202ENST00000417448 MOCS2O96007 188 aaPredicted RBP18.45■□□□□ 0.54
VCP-202ENST00000417448 CD70P32970 193 aa18.45■□□□□ 0.54
VCP-202ENST00000417448 TBX2Q13207 712 aaPredicted RBP18.45■□□□□ 0.54
VCP-202ENST00000417448 NME3Q13232 169 aa18.45■□□□□ 0.54
VCP-202ENST00000417448 OTUD1Q5VV17 481 aaPredicted RBP18.45■□□□□ 0.54
VCP-202ENST00000417448 CDCP2Q5VXM1 449 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms