RNA–Protein interactions for RNA: ENST00000415669.3

SAPCD1-208, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SAPCD1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-208ENST00000415669 PCDH19Q8TAB3 1148 aa14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 KRT35Q92764 455 aa14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 RNF25Q96BH1 459 aaPredicted RBP14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 FAM126AQ9BYI3 521 aaPredicted RBP14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 SLC39A8Q9C0K1 460 aa14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 KLC2Q9H0B6 622 aa14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 SP110Q9HB58 689 aa14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 CD248Q9HCU0 757 aa14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 PRSS16Q9NQE7 514 aa14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 ZSCAN32Q9NX65 697 aa14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 SUN2Q9UH99 717 aa14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 ACTL7AQ9Y615 435 aa14.61□□□□□ -0.07
SAPCD1-208ENST00000415669 SPAG17Q6Q759 2223 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 ZSCAN5CA6NGD5 496 aaPredicted RBP14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 K7ERQ8 282 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 AXIN1O15169 862 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 ATP9BO43861 1147 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 MFSD11O43934 449 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 FTCDO95954 541 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 HOXA6P31267 233 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 CTNNA1P35221 906 aaKnown RBP14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 VASPP50552 380 aaPredicted RBP14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 PAPOLAP51003 745 aaKnown RBP14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 CLCN6P51797 869 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 DLG2Q15700 870 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 AFMIDQ63HM1 303 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 ZC3H14Q6PJT7 736 aaKnown RBP14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 PEX26Q7Z412 305 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 WDR5BQ86VZ2 330 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 RFX6Q8HWS3 928 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 KATNAL2Q8IYT4 538 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 RNF10Q8N5U6 811 aaKnown RBP14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 OR2T3Q8NH03 318 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 ATOH1Q92858 354 aaPredicted RBP14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 FAF2Q96CS3 445 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 MRGPRX1Q96LB2 322 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 MKRN2Q9H000 416 aaKnown RBP14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 IRF2BPLQ9H1B7 796 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 FAM86C1Q9NVL1 165 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 EBF1Q9UH73 591 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 AMFRQ9UKV5 643 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 FCF1Q9Y324 198 aaKnown RBP14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 PCDHGA2Q9Y5H1 932 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 R4GN57 208 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 THADAQ6YHU6 1953 aa14.6□□□□□ -0.07
SAPCD1-208ENST00000415669 MUC6Q6W4X9 2439 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 TARSL2A2RTX5 802 aaKnown RBP14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 CCDC66A2RUB6 948 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 C3orf70A6NLC5 250 aaPredicted RBP14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 ZNF487B1APH4 448 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 SMAD6O43541 496 aaKnown RBP14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 CTNNA2P26232 953 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 COPAP53621 1224 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 SLC20A2Q08357 652 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 MFSD7Q6UXD7 560 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 ARHGAP36Q6ZRI8 547 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 NT5DC3Q86UY8 548 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 VSIG1Q86XK7 387 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 TP53INP2Q8IXH6 220 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 ATPAF2Q8N5M1 289 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 FRS2Q8WU20 508 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 PRCCQ92733 491 aaPredicted RBP14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 NELL1Q92832 810 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 PTPRN2Q92932 1015 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 RBM41Q96IZ5 413 aaKnown RBP14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 CCDC114Q96M63 670 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 RNF157Q96PX1 679 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 ALS2CR12Q96Q35 445 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 MAK16Q9BXY0 300 aaKnown RBP14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 TNKS2Q9H2K2 1166 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 FBRSQ9HAH7 460 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 PRDM16Q9HAZ2 1276 aa14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 UBA2Q9UBT2 640 aaPredicted RBP14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 PACSIN2Q9UNF0 486 aaPredicted RBP14.59□□□□□ -0.07
SAPCD1-208ENST00000415669 CCDC163A0A0D9SF12 145 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 CXorf51AA0A1B0GTR3 108 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 J3KR12 359 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 APOL1O14791 398 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 PRAMEF11O60813 436 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 TMCC1O94876 653 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 ZRANB2O95218 330 aaKnown RBP eCLIP14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 MAP3K6O95382 1288 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 RECQLP46063 649 aaPredicted RBP14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 DNA2P51530 1060 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 DYNLT1P63172 113 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 SRSF5Q13243 272 aaKnown RBP14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 ELAVL3Q14576 367 aaKnown RBP14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 PAFAH1B3Q15102 231 aaKnown RBP14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 LLGL1Q15334 1064 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 C9orf64Q5T6V5 341 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 KAZNQ674X7 775 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 ZNF776Q68DI1 518 aaPredicted RBP14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 SPOCD1Q6ZMY3 1216 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 ZNF662Q6ZS27 426 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 TMPRSS6Q8IU80 811 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 STK40Q8N2I9 435 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 PQLC3Q8N755 202 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 ZBTB44Q8NCP5 570 aa14.58□□□□□ -0.08
SAPCD1-208ENST00000415669 OR8D1Q8WZ84 308 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms