RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 TBC1D3CQ6IPX1 549 aa12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 COL27A1Q8IZC6 1860 aaPredicted RBP12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 TBC1D3Q8IZP1 549 aaPredicted RBP12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 PIP4K2CQ8TBX8 421 aa12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 SERAC1Q96JX3 654 aa12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 HSD3B7Q9H2F3 369 aa12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 ERVMER34-1Q9H9K5 563 aa12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 MPP6Q9NZW5 540 aa12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 SLC12A6Q9UHW9 1150 aa12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 VPS51Q9UID3 782 aa12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 RAXQ9Y2V3 346 aa12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 ACTL7AQ9Y615 435 aa12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 BAHCC1Q9P281 2608 aa12.75□□□□□ -0.37
NCKIPSD-203ENST00000415281 TDRD6O60522 2096 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 DFNA5O60443 496 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 CLDN11O75508 207 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 ATP1A3P13637 1013 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 ZNF18P17022 549 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 EPHA8P29322 1005 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 KRT9P35527 623 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 ACADVLP49748 655 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 COPB1P53618 953 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 C21orf59P57076 290 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 RNASE9P60153 205 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 ZNF177Q13360 481 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 COL28A1Q2UY09 1125 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 NAPEPLDQ6IQ20 393 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 LINGO4Q6UY18 593 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 ADAT2Q7Z6V5 191 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 TRIM69Q86WT6 500 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 CCDC117Q8IWD4 279 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 SLC25A45Q8N413 288 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 EID2Q8N6I1 236 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 MFSD2AQ8NA29 543 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 TMEM145Q8NBT3 493 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 RNF34Q969K3 372 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 CRELD1Q96HD1 420 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 C1orf74Q96LT6 269 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 BBC3Q96PG8 261 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 KDM4CQ9H3R0 1056 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 WDCPQ9H6R7 721 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 CBX8Q9HC52 389 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 AASDHPPTQ9NRN7 309 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 NDFIP2Q9NV92 336 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 LIMA1Q9UHB6 759 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 ZFR2Q9UPR6 939 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 CEP83Q9Y592 693 aa12.74□□□□□ -0.37
NCKIPSD-203ENST00000415281 ACACAQ13085 2346 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 ENC1O14682 589 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 EPHB6O15197 1021 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 ALOX15BO15296 676 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 SLC7A4O43246 635 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 LDOC1O95751 146 aaPredicted RBP12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 MMEP08473 750 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 RRM1P23921 792 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 SCNN1AP37088 669 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 KLK7P49862 253 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 SULT1E1P49888 294 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 NOMO3P69849 1222 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 UBXN1Q04323 297 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 FGL2Q14314 439 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 IQCB1Q15051 598 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 SLC25A52Q3SY17 297 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 ACCSLQ4AC99 568 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 SOWAHCQ53LP3 525 aaPredicted RBP12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 BRMS1LQ5PSV4 323 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 FKBP15Q5T1M5 1219 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 TAF3Q5VWG9 929 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 FBXL19Q6PCT2 694 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 LUZP1Q86V48 1076 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 OR7D4Q8NG98 312 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 OR8D1Q8WZ84 308 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 KLK6Q92876 244 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 C18orf8Q96DM3 657 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 PCMTD1Q96MG8 357 aaPredicted RBP12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 NOX5Q96PH1 765 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 GANQ9H2C0 597 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 GDF3Q9NR23 364 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 NOCTQ9UK39 431 aaKnown RBP12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 VPS28Q9UK41 221 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 NEU3Q9UQ49 428 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 WASF2Q9Y6W5 498 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 ATRXP46100 2492 aa12.73□□□□□ -0.37
NCKIPSD-203ENST00000415281 URB1O60287 2271 aaKnown RBP12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 KNTC1P50748 2209 aa12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 E9PAM4 449 aa12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 FAM72CH0Y354 149 aa12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 TRIM38O00635 465 aa12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 RNGTTO60942 597 aaKnown RBP12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 ITGAVP06756 1048 aa12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 UCHL3P15374 230 aa12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 CHRNA3P32297 505 aa12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 NNMTP40261 264 aa12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 OXCT1P55809 520 aa12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 ARF5P84085 180 aa12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 SFSWAPQ12872 951 aaKnown RBP12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 PTP4A2Q12974 167 aa12.72□□□□□ -0.37
NCKIPSD-203ENST00000415281 COL9A2Q14055 689 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms