RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 DDX47Q9H0S4 455 aaKnown RBP13.56□□□□□ -0.24
CNN3-203ENST00000415017 MUC3BQ9H195 1237 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 ATP13A1Q9HD20 1204 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 CD320Q9NPF0 282 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 HEBP1Q9NRV9 189 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 AMACRQ9UHK6 382 aa13.56□□□□□ -0.24
CNN3-203ENST00000415017 TIMM44O43615 452 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 SNAP91O60641 907 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 ZNF821O75541 412 aaPredicted RBP13.55□□□□□ -0.24
CNN3-203ENST00000415017 GCATO75600 419 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 KAT7O95251 611 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 ASLP04424 464 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 TNFRSF4P43489 277 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 SOX9P48436 509 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 CLCN6P51797 869 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 GDF10P55107 478 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 SLC10A7Q0GE19 358 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 RFTN1Q14699 578 aaPredicted RBP13.55□□□□□ -0.24
CNN3-203ENST00000415017 PTPRNQ16849 979 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 PREPLQ4J6C6 727 aaPredicted RBP13.55□□□□□ -0.24
CNN3-203ENST00000415017 SLC44A4Q53GD3 710 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 MBLAC2Q68D91 279 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 CCDC33Q8N5R6 958 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 TTC8Q8TAM2 541 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 VAT1Q99536 393 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 TMEM121Q9BTD3 319 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 ELOVL2Q9NXB9 296 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 WNT16Q9UBV4 365 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 FEZ2Q9UHY8 353 aaPredicted RBP13.55□□□□□ -0.24
CNN3-203ENST00000415017 VPS28Q9UK41 221 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 ATP8A1Q9Y2Q0 1164 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 PIAS3Q9Y6X2 628 aa13.55□□□□□ -0.24
CNN3-203ENST00000415017 CTAGE15A4D2H0 777 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 H7C0C1 242 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 K7EQS6 105 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 ATP9BO43861 1147 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 SRPRAP08240 638 aaKnown RBP13.54□□□□□ -0.24
CNN3-203ENST00000415017 DLDP09622 509 aaKnown RBP13.54□□□□□ -0.24
CNN3-203ENST00000415017 CTAGE8P0CG41 777 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 C7P10643 843 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 CCNB1P14635 433 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 HNRNPLP14866 589 aaKnown RBP eCLIP13.54□□□□□ -0.24
CNN3-203ENST00000415017 PTPN3P26045 913 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 CTSOP43234 321 aaPredicted RBP13.54□□□□□ -0.24
CNN3-203ENST00000415017 ATP5OP48047 213 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 GEMIN4P57678 1058 aaKnown RBP13.54□□□□□ -0.24
CNN3-203ENST00000415017 ECT2LQ008S8 904 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 LMNB2Q03252 620 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 PRKCQQ04759 706 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 C2orf54Q08AI8 447 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 ZBTB17Q13105 803 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 SNX1Q13596 522 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 DHX34Q14147 1143 aaKnown RBP13.54□□□□□ -0.24
CNN3-203ENST00000415017 CYTH1Q15438 398 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 P3H1Q32P28 736 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 TEX44Q53QW1 395 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 HEATR6Q6AI08 1181 aaKnown RBP13.54□□□□□ -0.24
CNN3-203ENST00000415017 IL31Q6EBC2 164 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 RETSATQ6NUM9 610 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 DARS2Q6PI48 645 aaKnown RBP13.54□□□□□ -0.24
CNN3-203ENST00000415017 B4GALNT4Q76KP1 1039 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 METTL3Q86U44 580 aaKnown RBP13.54□□□□□ -0.24
CNN3-203ENST00000415017 CTAGE6Q86UF2 777 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 SFTPA1Q8IWL2 248 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 CTAGE4Q8IX94 777 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 PLPP6Q8IY26 295 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 UBALD2Q8IYN6 164 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 GLIS1Q8NBF1 620 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 NOA1Q8NC60 698 aaKnown RBP13.54□□□□□ -0.24
CNN3-203ENST00000415017 LRRN4CLQ8ND94 238 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 KCNV2Q8TDN2 545 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 LRRN4Q8WUT4 740 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 ISG20Q96AZ6 181 aaKnown RBP13.54□□□□□ -0.24
CNN3-203ENST00000415017 TEKT5Q96M29 485 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 PSKH2Q96QS6 385 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 P2RY13Q9BPV8 354 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 SPON2Q9BUD6 331 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 C10orf88Q9H8K7 445 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 ZNF148Q9UQR1 794 aa13.54□□□□□ -0.24
CNN3-203ENST00000415017 KCNK1O00180 336 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 CBX4O00257 560 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 MT-CO1P00395 513 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 SRCP12931 536 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 CR2P20023 1033 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 IVDP26440 423 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 CD68P34810 354 aaPredicted RBP13.53□□□□□ -0.24
CNN3-203ENST00000415017 KIR2DL1P43626 348 aaPredicted RBP13.53□□□□□ -0.24
CNN3-203ENST00000415017 SERPINH1P50454 418 aaKnown RBP13.53□□□□□ -0.24
CNN3-203ENST00000415017 STARD6P59095 220 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 NSUN2Q08J23 767 aaKnown RBP eCLIP13.53□□□□□ -0.24
CNN3-203ENST00000415017 AP1B1Q10567 949 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 LBRQ14739 615 aaKnown RBP13.53□□□□□ -0.24
CNN3-203ENST00000415017 FSTL4Q6MZW2 842 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 SYDE1Q6ZW31 735 aaPredicted RBP13.53□□□□□ -0.24
CNN3-203ENST00000415017 GJD3Q8N144 294 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 ZNF567Q8N184 647 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 SH2D3CQ8N5H7 860 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 CCNYQ8ND76 341 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 FRS2Q8WU20 508 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 SEC14L1Q92503 715 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms