RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SAGE1Q9NXZ1 904 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 MSRB1Q9NZV6 116 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 GTF2A1LQ9UNN4 478 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 SLC12A4Q9UP95 1085 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 SQORQ9Y6N5 450 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 IQGAP1P46940 1657 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 ABCA8O94911 1581 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 TTC37Q6PGP7 1564 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 ERCC6Q03468 1493 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 PLA2R1Q13018 1463 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 IL16Q14005 1332 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 A0A0G2JK05 382 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 A6NCN8 305 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 B4DGG1 531 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 DYNC1I1O14576 645 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 IKBKBO14920 756 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 FIBPO43427 364 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 DNPH1O43598 174 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZC3H11AO75152 810 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 LARGE1O95461 756 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 ALDOAP04075 364 aaKnown RBP4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 IFIT2P09913 472 aaKnown RBP4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 TNFRSF1BP20333 461 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 HOXC13P31276 330 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 RARSP54136 660 aaKnown RBP4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 POLE2P56282 527 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 SPARCL1Q14515 664 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 PGM5Q15124 567 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 TAF11Q15544 211 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 KLHL40Q2TBA0 621 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 TTLL5Q6EMB2 1281 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 PGBD2Q6P3X8 592 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 CFAP161Q6P656 301 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 C9orf47Q6ZRZ4 202 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 GATAD2AQ86YP4 633 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 VPS37AQ8NEZ2 397 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 CENPIQ92674 756 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 CDHR1Q96JP9 859 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 NLRP4Q96MN2 994 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 NPAS1Q99742 590 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 HTATIP2Q9BUP3 242 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 FAM234AQ9H0X4 552 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 CCDC134Q9H6E4 229 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 MLXIPQ9HAP2 919 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 FBXO2Q9UK22 296 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 DDX19BQ9UMR2 479 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 LAMP3Q9UQV4 416 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 MRC2Q9UBG0 1479 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 PTPRTO14522 1441 aa4.04□□□□□ -1.76
HMGB3P23-201ENST00000414981 NSD2O96028 1365 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 ABCC11Q96J66 1382 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 USP32Q8NFA0 1604 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 M0QYT0 321 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 IPO8O15397 1037 aaKnown RBP4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 NBNO60934 754 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 RPP40O75818 363 aaKnown RBP4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 NDUFB8O95169 186 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 WNT1P04628 370 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 LCKP06239 509 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 MSNP26038 577 aaKnown RBP4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 KLRK1P26718 216 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 GRK5P34947 590 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 NUCB2P80303 420 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 MVPQ14764 893 aaKnown RBP4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 STARD3Q14849 445 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 INPP5JQ15735 1006 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 SMTNL2Q2TAL5 461 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 KIAA1755Q5JYT7 1200 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 SPECC1Q5M775 1068 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 ANKRD40Q6AI12 368 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 TOGARAM2Q6ZUX3 1019 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 NDUFAF2Q8N183 169 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 FAM71BQ8TC56 605 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 CCDC47Q96A33 483 aaKnown RBP4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 SLC25A28Q96A46 364 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 TXNRD2Q9NNW7 524 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 RIC8AQ9NPQ8 531 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 UTS2RQ9UKP6 389 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 ODF2LQ9ULJ1 636 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 COG5Q9UP83 839 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 UHRF1BP1LA0JNW5 1464 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 MYOM2P54296 1465 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 RTEL1-TNFRSF6BF6WH68 1400 aa4.03□□□□□ -1.76
HMGB3P23-201ENST00000414981 SHROOM2Q13796 1616 aa4.03□□□□□ -1.77
HMGB3P23-201ENST00000414981 PREX2Q70Z35 1606 aa4.03□□□□□ -1.77
HMGB3P23-201ENST00000414981 MADDQ8WXG6 1647 aa4.03□□□□□ -1.77
HMGB3P23-201ENST00000414981 TRPM2O94759 1503 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 EFCAB8A8MWE9 144 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 KCNJ18B7U540 433 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 HSP90AB1P08238 724 aaKnown RBP4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 ALDOCP09972 364 aaKnown RBP4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 SETSIPP0DME0 302 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 GLULP15104 373 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 TNFAIP3P21580 790 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 CCKARP32238 428 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 POLD2P49005 469 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 PPM1FP49593 454 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 ADPRHP54922 357 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 TAS2R50P59544 299 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 HMGN5P82970 282 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms