RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CDH6P55285 790 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 IFT88Q13099 833 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 DPYSL3Q14195 570 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 RAP1GAP2Q684P5 730 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 RFWD3Q6PCD5 774 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 MTSS1LQ765P7 747 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 CPLX4Q7Z7G2 160 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 CACNA2D3Q8IZS8 1091 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 TDRD5Q8NAT2 981 aaKnown RBP10.19□□□□□ -0.78
DDB1-202ENST00000414411 KCTD6Q8NC69 237 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 OSCP1Q8WVF1 389 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 ARHGEF2Q92974 986 aaKnown RBP10.19□□□□□ -0.78
DDB1-202ENST00000414411 FAF2Q96CS3 445 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 OTUB2Q96DC9 234 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 CTNNAL1Q9UBT7 734 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 LGALS13Q9UHV8 139 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 FAM50BQ9Y247 325 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 EFR3BQ9Y2G0 817 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 NCOR1O75376 2440 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 F5P12259 2224 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 LOC730098B7Z3J9 87 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 E9PAM4 449 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 SLC9A3R1O14745 358 aaPredicted RBP10.19□□□□□ -0.78
DDB1-202ENST00000414411 ABHD2P08910 425 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 ZSCAN5DPP0CG00 497 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 PSMC3P17980 439 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 EML3Q32P44 896 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 PPP6R3Q5H9R7 873 aaPredicted RBP10.19□□□□□ -0.78
DDB1-202ENST00000414411 RNF43Q68DV7 783 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 MAP7D3Q8IWC1 876 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 TTC16Q8NEE8 873 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 SLC35B2Q8TB61 432 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 IGSF8Q969P0 613 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 NXPE3Q969Y0 559 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 HAUS1Q96CS2 278 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 ASIC4Q96FT7 647 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 C9orf72Q96LT7 481 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 RBM15Q96T37 977 aaKnown RBP eCLIP10.19□□□□□ -0.783e-7■■□□□ 13.6
DDB1-202ENST00000414411 DDX50Q9BQ39 737 aaKnown RBP10.19□□□□□ -0.78
DDB1-202ENST00000414411 KXD1Q9BQD3 176 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 PCDH9Q9HC56 1237 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 RCOR3Q9P2K3 495 aaPredicted RBP10.19□□□□□ -0.78
DDB1-202ENST00000414411 THEGQ9P2T0 379 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 PPARGC1AQ9UBK2 798 aaKnown RBP10.19□□□□□ -0.78
DDB1-202ENST00000414411 ZNF212Q9UDV6 495 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 LIMD1Q9UGP4 676 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 VANGL2Q9ULK5 521 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 WNT6Q9Y6F9 365 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 NUMBLQ9Y6R0 609 aa10.19□□□□□ -0.78
DDB1-202ENST00000414411 CREB3O43889 395 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 CDH16O75309 829 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 FSBPO95073 299 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 GOT1P17174 413 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 HTR7P34969 479 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 MAGEA4P43358 317 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 GPS1Q13098 491 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 MMRN1Q13201 1228 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 DPYSQ14117 519 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 STAT4Q14765 748 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 MORF4L2Q15014 288 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 AAK1Q2M2I8 961 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 CHSY1Q86X52 802 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 LGI2Q8N0V4 545 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 PCDH19Q8TAB3 1148 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 DEPDC1BQ8WUY9 529 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 RSAD2Q8WXG1 361 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 CABS1Q96KC9 395 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 PRICKLE1Q96MT3 831 aaPredicted RBP10.18□□□□□ -0.78
DDB1-202ENST00000414411 CSPG4P5Q96PW8 444 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 ZNF670Q9BS34 389 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 KCNK12Q9HB15 430 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 THG1LQ9NWX6 298 aaKnown RBP10.18□□□□□ -0.78
DDB1-202ENST00000414411 DUS2Q9NX74 493 aaKnown RBP10.18□□□□□ -0.78
DDB1-202ENST00000414411 EURLQ9NYK6 297 aa10.18□□□□□ -0.78
DDB1-202ENST00000414411 TPX2Q9ULW0 747 aaKnown RBP10.18□□□□□ -0.78
DDB1-202ENST00000414411 TMEM120BA0PK00 339 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 F5H5T6 163 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 ARNTLO00327 626 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 EEF2KO00418 725 aaKnown RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 TRDMT1O14717 391 aaKnown RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 NDC80O14777 642 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 CHADO15335 359 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 CNTN5O94779 1100 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 ETS1P14921 441 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 PECAM1P16284 738 aaPredicted RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 SGSHP51688 502 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 RPS24P62847 133 aaKnown RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 KRT81Q14533 505 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 TTC31Q49AM3 519 aaPredicted RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 ALFQ53S48 1182 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 ANKRD20A8PQ5CZ79 823 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 MPP7Q5T2T1 576 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 RNF187Q5TA31 235 aaPredicted RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 RNASEH2BQ5TBB1 312 aaKnown RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 RFX8Q6ZV50 586 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 BBS12Q6ZW61 710 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 PACS2Q86VP3 889 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 TMEM25Q86YD3 366 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 SLC44A3Q8N4M1 653 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 PQLC3Q8N755 202 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms