RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SLC29A3Q9BZD2 475 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 HIPK3Q9H422 1215 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 AAMDCQ9H7C9 122 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 TTC12Q9H892 705 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 WASH6PQ9NQA3 447 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 ELOVL5Q9NYP7 299 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 GGA3Q9NZ52 723 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 GRHL1Q9NZI5 618 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 SLC13A4Q9UKG4 626 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 ICKQ9UPZ9 632 aa4.13□□□□□ -1.75
HMGB1P11-201ENST00000413899 MST1RQ04912 1400 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 CCDC196A0A1B0GTZ2 297 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 OR6C68A6NDL8 312 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 SH2D7A6NKC9 451 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 A6NNC1 897 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 MDM4O15151 490 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 STRNO43815 780 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 HBP1O60381 514 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 EPN2O95208 641 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 KLKB1P03952 638 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 PYGLP06737 847 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 POLBP06746 335 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 CNTFP26441 200 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 KLRC2P26717 231 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 PTGER1P34995 402 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 PSMC2P35998 433 aaKnown RBP4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 GPD2P43304 727 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 NR4A2P43354 598 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 ALDH7A1P49419 539 aaKnown RBP4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 RPE65Q16518 533 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 AP5B1Q2VPB7 878 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 ENTPD8Q5MY95 495 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 TMEM268Q5VZI3 342 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 TBC1D9BQ66K14 1250 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 LVRNQ6Q4G3 990 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 LRRC8DQ7L1W4 858 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZDHHC23Q8IYP9 409 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 SMG7Q92540 1137 aaKnown RBP4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 STAMQ92783 540 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 CD180Q99467 661 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 IFT27Q9BW83 186 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 GPR63Q9BZJ6 419 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZBTB40Q9NUA8 1239 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 DECR2Q9NUI1 292 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 DHDHQ9UQ10 334 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 SLC4A4Q9Y6R1 1079 aa4.12□□□□□ -1.75
HMGB1P11-201ENST00000413899 RB1CC1Q8TDY2 1594 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 GOLGA6L10A0A0M3HER8 536 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 A0A1W2PPC1 479 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 EYA2O00167 538 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 NPHP1O15259 732 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 RNMTO43148 476 aaKnown RBP4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 KIF1CO43896 1103 aaKnown RBP4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 TULP3O75386 442 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 TMCC1O94876 653 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 CHRM4P08173 479 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 TNFRSF1BP20333 461 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 SKIV2L2P42285 1042 aaKnown RBP4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 PLCD1P51178 756 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 CLCNKBP51801 687 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 ALFQ53S48 1182 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 NAPEPLDQ6IQ20 393 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 B4GALNT4Q76KP1 1039 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 WDR5BQ86VZ2 330 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 KDM1BQ8NB78 822 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 RAB40AQ8WXH6 277 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 VCPIP1Q96JH7 1222 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 MAP6D1Q9H9H5 199 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 FZD3Q9NPG1 666 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 ATP8A2Q9NTI2 1148 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 C9orf78Q9NZ63 289 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 COG5Q9UP83 839 aa4.11□□□□□ -1.75
HMGB1P11-201ENST00000413899 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 C17orf102A2RUQ5 167 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 GUCY1B2O75343 617 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 NDUFB8O95169 186 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 MYZAPP0CAP1 466 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 CHRNB1P11230 501 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 UNGP13051 313 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 TBXAS1P24557 533 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 TNFSF8P32971 234 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 RASSF2P50749 326 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 GAD2Q05329 585 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 SLC18A3Q16572 532 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 MANEAQ5SRI9 462 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 TRIM74Q86UV6 250 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 TRIM73Q86UV7 250 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 GPSM1Q86YR5 675 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 DPP10Q8N608 796 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 NRACQ8N912 160 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZNF548Q8NEK5 533 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 RFWD2Q8NHY2 731 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 BICD2Q8TD16 824 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 TMEM174Q8WUU8 243 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 HTRA1Q92743 480 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 HMCESQ96FZ2 354 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZNF419Q96HQ0 510 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZNF48Q96MX3 618 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 FUZQ9BT04 418 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms