RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 COL4A2P08572 1712 aa19.01■□□□□ 0.63
CIRBP-202ENST00000413636 MIA3Q5JRA6 1907 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19■□□□□ 0.63
CIRBP-202ENST00000413636 WASH4PA8MWX3 477 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 H0Y626 953 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 RNF40O75150 1001 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 ZSCAN5DPP0CG00 497 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 OR1E1P30953 314 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 ZNF177Q13360 481 aaPredicted RBP19■□□□□ 0.63
CIRBP-202ENST00000413636 GAB4Q2WGN9 574 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 RNF43Q68DV7 783 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 MFN1Q8IWA4 741 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 PPIL6Q8IXY8 311 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 FAM71DQ8N9W8 422 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 GLIS1Q8NBF1 620 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 WFDC5Q8TCV5 224 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 PHACTR1Q9C0D0 580 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 PAK5Q9P286 719 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 NFS1Q9Y697 457 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 NUP205Q92621 2012 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 CACNG3O60359 315 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 SRFP11831 508 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 ETS1P14921 441 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 GJA4P35212 333 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 RPL22P35268 128 aaKnown RBP19■□□□□ 0.63
CIRBP-202ENST00000413636 SOX9P48436 509 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 CDH18Q13634 790 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 RNASEH2BQ5TBB1 312 aaKnown RBP19■□□□□ 0.63
CIRBP-202ENST00000413636 NCBP2-AS2Q69YL0 99 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 CCDC25Q86WR0 208 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 C12orf40Q86WS4 652 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 RNF135Q8IUD6 432 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 DNASE1L2Q92874 299 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 XPO6Q96QU8 1125 aaKnown RBP19■□□□□ 0.63
CIRBP-202ENST00000413636 RETREG1Q9H6L5 497 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 USP29Q9HBJ7 922 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 TRPV5Q9NQA5 729 aa19■□□□□ 0.63
CIRBP-202ENST00000413636 MYZAPP0CAP1 466 aa18.99■□□□□ 0.63
CIRBP-202ENST00000413636 MAPKAPK2P49137 400 aa18.99■□□□□ 0.63
CIRBP-202ENST00000413636 GDF10P55107 478 aa18.99■□□□□ 0.63
CIRBP-202ENST00000413636 IFFO1Q0D2I5 559 aa18.99■□□□□ 0.63
CIRBP-202ENST00000413636 PAFAH1B3Q15102 231 aaKnown RBP18.99■□□□□ 0.63
CIRBP-202ENST00000413636 SLC45A4Q5BKX6 768 aa18.99■□□□□ 0.63
CIRBP-202ENST00000413636 FSCBQ5H9T9 825 aa18.99■□□□□ 0.63
CIRBP-202ENST00000413636 CEP85LQ5SZL2 805 aa18.99■□□□□ 0.63
CIRBP-202ENST00000413636 CXorf57Q6NSI4 855 aaKnown RBP18.99■□□□□ 0.63
CIRBP-202ENST00000413636 CCDC117Q8IWD4 279 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-202ENST00000413636 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.99■□□□□ 0.63
CIRBP-202ENST00000413636 OR52K2Q8NGK3 314 aa18.99■□□□□ 0.63
CIRBP-202ENST00000413636 SLC2A4RGQ9NR83 387 aa18.99■□□□□ 0.63
CIRBP-202ENST00000413636 DUSP12Q9UNI6 340 aa18.99■□□□□ 0.63
CIRBP-202ENST00000413636 SORCS3Q9UPU3 1222 aa18.99■□□□□ 0.63
CIRBP-202ENST00000413636 TBC1D30Q9Y2I9 924 aa18.99■□□□□ 0.63
CIRBP-202ENST00000413636 POLR3GO15318 223 aaPredicted RBP18.98■□□□□ 0.63
CIRBP-202ENST00000413636 NCAM2O15394 837 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 KCNN4O15554 427 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 RIPK2O43353 540 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 RHOCP08134 193 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 SLC6A11P48066 632 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 PFKPQ01813 784 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 ASTLQ6HA08 431 aaPredicted RBP18.98■□□□□ 0.63
CIRBP-202ENST00000413636 PRUNE1Q86TP1 453 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 ETFBKMTQ8IXQ9 262 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 NPWQ8N729 165 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 NETO2Q8NC67 525 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 FIBINQ8TAL6 211 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 CHFRQ96EP1 664 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 NECAB3Q96P71 396 aaPredicted RBP18.98■□□□□ 0.63
CIRBP-202ENST00000413636 KLC2Q9H0B6 622 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 SEMA4AQ9H3S1 761 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 HEBP1Q9NRV9 189 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 DNAJC17Q9NVM6 304 aaKnown RBP18.98■□□□□ 0.63
CIRBP-202ENST00000413636 VPS18Q9P253 973 aa18.98■□□□□ 0.63
CIRBP-202ENST00000413636 FARP1Q9Y4F1 1045 aaPredicted RBP18.98■□□□□ 0.63
CIRBP-202ENST00000413636 TRIM24O15164 1050 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 TULP3O75386 442 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 GABPB1Q06547 395 aaPredicted RBP18.97■□□□□ 0.63
CIRBP-202ENST00000413636 PDK1Q15118 436 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 C6orf118Q5T5N4 469 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 NAIF1Q69YI7 327 aaPredicted RBP18.97■□□□□ 0.63
CIRBP-202ENST00000413636 SETD3Q86TU7 594 aaPredicted RBP18.97■□□□□ 0.63
CIRBP-202ENST00000413636 GJD3Q8N144 294 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 UMODL1-AS1Q8N2C9 162 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 TFB1MQ8WVM0 346 aaKnown RBP18.97■□□□□ 0.63
CIRBP-202ENST00000413636 CELF6Q96J87 481 aaKnown RBP18.97■□□□□ 0.63
CIRBP-202ENST00000413636 OLFM3Q96PB7 478 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 QKIQ96PU8 341 aaKnown RBP eCLIP18.97■□□□□ 0.63
CIRBP-202ENST00000413636 SLC2A11Q9BYW1 496 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 FRMD8Q9BZ67 464 aaPredicted RBP18.97■□□□□ 0.63
CIRBP-202ENST00000413636 BRD8Q9H0E9 1235 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 NOL6Q9H6R4 1146 aaKnown RBP18.97■□□□□ 0.63
CIRBP-202ENST00000413636 CD320Q9NPF0 282 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 ABCB8Q9NUT2 735 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 DONSONQ9NYP3 566 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 DTLQ9NZJ0 730 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 FBXO10Q9UK96 956 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 KIAA1549LQ6ZVL6 1849 aa18.97■□□□□ 0.63
CIRBP-202ENST00000413636 CHD5Q8TDI0 1954 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 GOLGA6CA6NDK9 693 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 HMGB1P1B2RPK0 211 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms