RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 KCNE2Q9Y6J6 123 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 SPATA31A5Q5VU36 1347 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 SPATA31A6Q5VVP1 1343 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 SPATA31A7Q8IWB4 1347 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 POLR2AP24928 1970 aaKnown RBP5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 C17orf113A0A1B0GUU1 675 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 FAM237BA0A1B0GVD1 139 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 TARSL2A2RTX5 802 aaKnown RBP5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 UBE2Q2LH0YL09 131 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 RRHO14718 337 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 LDLRAD4O15165 306 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 SEC14L2O76054 403 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 IL1AP01583 271 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 HLA-DQA2P01906 255 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 AKR1B1P15121 316 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 RRM1P23921 792 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 BSGP35613 385 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 PPARGP37231 505 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 MC1RQ01726 317 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 RHAGQ02094 409 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 CREB5Q02930 508 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 SEMA3AQ14563 771 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 EDRF1Q3B7T1 1238 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 FAM171A1Q5VUB5 890 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 IGFL4Q6B9Z1 124 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 ZNF280DQ6N043 979 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 ZNF474Q6S9Z5 364 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 IL20RBQ6UXL0 311 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 MOB3CQ70IA8 216 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 TADA2BQ86TJ2 420 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 CADM4Q8NFZ8 388 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 SLC9A6Q92581 669 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 KAT2BQ92831 832 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 SMARCE1Q969G3 411 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 NSUN4Q96CB9 384 aaKnown RBP5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 REPS1Q96D71 796 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 IFT27Q9BW83 186 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 MUC13Q9H3R2 512 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 TXNRD2Q9NNW7 524 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 ENTPD7Q9NQZ7 604 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 HCFC1R1Q9NWW0 138 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 NKIRAS2Q9NYR9 191 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 NLKQ9UBE8 527 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 CTNNAL1Q9UBT7 734 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 HSPB7Q9UBY9 170 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 ICKQ9UPZ9 632 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 LYVE1Q9Y5Y7 322 aa5.11□□□□□ -1.59
HMGB3P31-201ENST00000413333 CXorf65A6NEN9 183 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 POC1B-GALNT4F8VUJ3 575 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 VILLO15195 856 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 MSI1O43347 362 aaKnown RBP5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 NARSO43776 548 aaKnown RBP5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 NFATC1O95644 943 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 ADAP00813 363 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 PORP16435 677 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 TACR3P29371 465 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 FMO4P31512 558 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 CPOXP36551 454 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 PBX3P40426 434 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 SOX2P48431 317 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 CLK3P49761 638 aaKnown RBP5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 CYP2J2P51589 502 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 SNX16P57768 344 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 NLRP5P59047 1200 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 CHAF1BQ13112 559 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 GALNT3Q14435 633 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 C5orf22Q49AR2 442 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 TMEM268Q5VZI3 342 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 ZKSCAN2Q63HK3 967 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 TTI2Q6NXR4 508 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 CDC73Q6P1J9 531 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 C17orf99Q6UX52 265 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 SLC46A3Q7Z3Q1 461 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 NEK8Q86SG6 692 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 FAM160B2Q86V87 743 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 RPAP2Q8IXW5 612 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 SRBD1Q8N5C6 995 aaKnown RBP5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 FRMD1Q8N878 549 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 PNLDC1Q8NA58 520 aaKnown RBP5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 CAGE1Q8TC20 777 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 INTS12Q96CB8 462 aaKnown RBP5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 CALML4Q96GE6 196 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 SERINC2Q96SA4 455 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 SNTG1Q9NSN8 517 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 C20orf141Q9NUB4 165 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 ASB6Q9NWX5 421 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 ZNF70Q9UC06 446 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 ADAM21Q9UKJ8 722 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 MAFFQ9ULX9 164 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 PCDHGB4Q9UN71 923 aa5.1□□□□□ -1.59
HMGB3P31-201ENST00000413333 A0A1W2PQM1 296 aa5.09□□□□□ -1.59
HMGB3P31-201ENST00000413333 TARM1B6A8C7 271 aa5.09□□□□□ -1.59
HMGB3P31-201ENST00000413333 KCNJ18B7U540 433 aa5.09□□□□□ -1.59
HMGB3P31-201ENST00000413333 GJB3O75712 270 aa5.09□□□□□ -1.59
HMGB3P31-201ENST00000413333 SEC31AO94979 1220 aaKnown RBP5.09□□□□□ -1.59
HMGB3P31-201ENST00000413333 SGPL1O95470 568 aa5.09□□□□□ -1.59
HMGB3P31-201ENST00000413333 TUBB4AP04350 444 aa5.09□□□□□ -1.59
HMGB3P31-201ENST00000413333 RARGP13631 454 aa5.09□□□□□ -1.59
HMGB3P31-201ENST00000413333 INSRRP14616 1297 aa5.09□□□□□ -1.59
HMGB3P31-201ENST00000413333 KLRC2P26717 231 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms