RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 IFT43Q96FT9 208 aa17.34■□□□□ 0.37
SCRN1-203ENST00000409570 PPP1R9BQ96SB3 815 aa17.34■□□□□ 0.37
SCRN1-203ENST00000409570 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.34■□□□□ 0.37
SCRN1-203ENST00000409570 CLMPQ9H6B4 373 aa17.34■□□□□ 0.37
SCRN1-203ENST00000409570 USP29Q9HBJ7 922 aa17.34■□□□□ 0.37
SCRN1-203ENST00000409570 METTL14Q9HCE5 456 aaKnown RBP17.34■□□□□ 0.37
SCRN1-203ENST00000409570 THSD1Q9NS62 852 aa17.34■□□□□ 0.37
SCRN1-203ENST00000409570 SLC12A6Q9UHW9 1150 aa17.34■□□□□ 0.37
SCRN1-203ENST00000409570 ZFR2Q9UPR6 939 aaKnown RBP17.34■□□□□ 0.37
SCRN1-203ENST00000409570 ATP6V1DQ9Y5K8 247 aa17.34■□□□□ 0.37
SCRN1-203ENST00000409570 AHCTF1Q8WYP5 2266 aa17.33■□□□□ 0.37
SCRN1-203ENST00000409570 E5RJQ4 531 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 RNF103O00237 685 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 NEBLO76041 1014 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 SRCP12931 536 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 DUSP3P51452 185 aaPredicted RBP17.33■□□□□ 0.36
SCRN1-203ENST00000409570 ZNF542PQ5EBM4 170 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 ZNF658Q5TYW1 1059 aaPredicted RBP17.33■□□□□ 0.36
SCRN1-203ENST00000409570 TMEM110Q86TL2 294 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 IFI44Q8TCB0 444 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 MAPK15Q8TD08 544 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 STK32AQ8WU08 396 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 KREMEN1Q96MU8 473 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 RPRD1AQ96P16 312 aaPredicted RBP17.33■□□□□ 0.36
SCRN1-203ENST00000409570 ABCG4Q9H172 646 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 THAP9Q9H5L6 903 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 VPS28Q9UK41 221 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 SATB2Q9UPW6 733 aa17.33■□□□□ 0.36
SCRN1-203ENST00000409570 NEMP2A6NFY4 417 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 KPNA3O00505 521 aaPredicted RBP17.32■□□□□ 0.36
SCRN1-203ENST00000409570 MT-CO1P00395 513 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 TGM2P21980 687 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 CHRNA3P32297 505 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 GCNT1Q02742 428 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 LRRC63Q05C16 580 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 AUHQ13825 339 aaKnown RBP17.32■□□□□ 0.36
SCRN1-203ENST00000409570 TAF5Q15542 800 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 C3orf38Q5JPI3 329 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 SEL1L3Q68CR1 1132 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 OR2A12Q8NGT7 310 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 MED8Q96G25 268 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 PRR11Q96HE9 360 aaPredicted RBP17.32■□□□□ 0.36
SCRN1-203ENST00000409570 BMFQ96LC9 184 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 MED15Q96RN5 788 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 DUSP23Q9BVJ7 150 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 FAM204AQ9H8W3 233 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 GPR27Q9NS67 375 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 DNAJC28Q9NX36 388 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 VANGL2Q9ULK5 521 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 CNTN6Q9UQ52 1028 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 HS3ST2Q9Y278 367 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 ZDHHC9Q9Y397 364 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 BOD1L1Q8NFC6 3051 aa17.32■□□□□ 0.36
SCRN1-203ENST00000409570 SYNJ2BP-COX16A0A087WUM0 186 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.31■□□□□ 0.36
SCRN1-203ENST00000409570 K7ENP7 123 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 SLC2A3P11169 496 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 CCR1P32246 355 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 GGCXP38435 758 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 HNRNPKP61978 463 aaKnown RBP eCLIP17.31■□□□□ 0.36
SCRN1-203ENST00000409570 ZNF177Q13360 481 aaPredicted RBP17.31■□□□□ 0.36
SCRN1-203ENST00000409570 MEA1Q16626 185 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 TMEM259Q4ZIN3 620 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 KIAA1614Q5VZ46 1190 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 OR6B2Q6IFH4 312 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 INO80CQ6PI98 192 aaPredicted RBP17.31■□□□□ 0.36
SCRN1-203ENST00000409570 Q6ZSR6 202 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 C14orf80Q86SX3 495 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 DEFB106AQ8N104 65 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 TMIEQ8NEW7 156 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 SLC46A1Q96NT5 459 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 PSMB7Q99436 277 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 EVA1BQ9NVM1 165 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 RMND1Q9NWS8 449 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 DDIT4Q9NX09 232 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 COX16Q9P0S2 106 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 TBC1D30Q9Y2I9 924 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 ENTPD2Q9Y5L3 495 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 HS3ST3A1Q9Y663 406 aa17.31■□□□□ 0.36
SCRN1-203ENST00000409570 SCN8AQ9UQD0 1980 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 A6NNZ2 444 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 K7ERQ8 282 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 SNAP91O60641 907 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 PCDH8O95206 1070 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 KRT10P13645 584 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 CDK17Q00537 523 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 KCNC4Q03721 635 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 CCDC15Q0P6D6 951 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 FGL2Q14314 439 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 FZD2Q14332 565 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 CDKN3Q16667 212 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 C5orf22Q49AR2 442 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 ZCCHC8Q6NZY4 707 aaKnown RBP17.3■□□□□ 0.36
SCRN1-203ENST00000409570 ERN2Q76MJ5 926 aaKnown RBP17.3■□□□□ 0.36
SCRN1-203ENST00000409570 PTAR1Q7Z6K3 402 aaPredicted RBP17.3■□□□□ 0.36
SCRN1-203ENST00000409570 DCP2Q8IU60 420 aaKnown RBP17.3■□□□□ 0.36
SCRN1-203ENST00000409570 CHST14Q8NCH0 376 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 ZNF548Q8NEK5 533 aaPredicted RBP17.3■□□□□ 0.36
SCRN1-203ENST00000409570 FAM174AQ8TBP5 190 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 ZNF606Q8WXB4 792 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms