RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 ETFBKMTQ8IXQ9 262 aa20.89■□□□□ 0.93
CHKB-201ENST00000406938 ZNF567Q8N184 647 aa20.89■□□□□ 0.93
CHKB-201ENST00000406938 GPR161Q8N6U8 529 aaKnown RBP20.89■□□□□ 0.93
CHKB-201ENST00000406938 USP33Q8TEY7 942 aa20.89■□□□□ 0.93
CHKB-201ENST00000406938 PNKPQ96T60 521 aa20.89■□□□□ 0.93
CHKB-201ENST00000406938 C2orf49Q9BVC5 232 aaPredicted RBP20.89■□□□□ 0.93
CHKB-201ENST00000406938 KLHL8Q9P2G9 620 aaPredicted RBP20.89■□□□□ 0.93
CHKB-201ENST00000406938 VPS51Q9UID3 782 aa20.89■□□□□ 0.93
CHKB-201ENST00000406938 FBXO10Q9UK96 956 aa20.89■□□□□ 0.93
CHKB-201ENST00000406938 INTS6Q9UL03 887 aaKnown RBP20.89■□□□□ 0.93
CHKB-201ENST00000406938 MYOFQ9NZM1 2061 aa20.89■□□□□ 0.93
CHKB-201ENST00000406938 BHMG1C9JSJ3 638 aaPredicted RBP20.88■□□□□ 0.93
CHKB-201ENST00000406938 TRIM24O15164 1050 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 OPHN1O60890 802 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 JCHAINP01591 159 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 PABPC1P11940 636 aaKnown RBP20.88■□□□□ 0.93
CHKB-201ENST00000406938 IL9P15248 144 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 ADCY8P40145 1251 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 ARF5P84085 180 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 NR1H3Q13133 447 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 TRADDQ15628 312 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 TEX44Q53QW1 395 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 ARHGEF18Q6ZSZ5 1173 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 TAB3Q8N5C8 712 aaPredicted RBP20.88■□□□□ 0.93
CHKB-201ENST00000406938 SEC14L1Q92503 715 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 VAT1Q99536 393 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 IL12RB2Q99665 862 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 BRD9Q9H8M2 597 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 KCNK12Q9HB15 430 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 PAK5Q9P286 719 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 LIMD1Q9UGP4 676 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 SNX24Q9Y343 169 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 ACTL7AQ9Y615 435 aa20.88■□□□□ 0.93
CHKB-201ENST00000406938 SHROOM3Q8TF72 1996 aa20.87■□□□□ 0.93
CHKB-201ENST00000406938 TULP3O75386 442 aa20.87■□□□□ 0.93
CHKB-201ENST00000406938 ZMPSTE24O75844 475 aa20.87■□□□□ 0.93
CHKB-201ENST00000406938 RPL21P46778 160 aaKnown RBP20.87■□□□□ 0.93
CHKB-201ENST00000406938 DGKGP49619 791 aa20.87■□□□□ 0.93
CHKB-201ENST00000406938 PLK1P53350 603 aa20.87■□□□□ 0.93
CHKB-201ENST00000406938 SLC10A7Q0GE19 358 aa20.87■□□□□ 0.93
CHKB-201ENST00000406938 HNRNPDQ14103 355 aaKnown RBP20.87■□□□□ 0.93
CHKB-201ENST00000406938 PUS10Q3MIT2 529 aaKnown RBP20.87■□□□□ 0.93
CHKB-201ENST00000406938 TMCO4Q5TGY1 634 aa20.87■□□□□ 0.93
CHKB-201ENST00000406938 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHKB-201ENST00000406938 NSMCE1Q8WV22 266 aa20.87■□□□□ 0.93
CHKB-201ENST00000406938 ZNF599Q96NL3 588 aa20.87■□□□□ 0.93
CHKB-201ENST00000406938 AGAP3Q96P47 875 aa20.87■□□□□ 0.93
CHKB-201ENST00000406938 UBA2Q9UBT2 640 aaPredicted RBP20.87■□□□□ 0.93
CHKB-201ENST00000406938 FAM50BQ9Y247 325 aa20.87■□□□□ 0.93
CHKB-201ENST00000406938 IVDP26440 423 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 RENBPP51606 427 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 TERF1P54274 439 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 LBRQ14739 615 aaKnown RBP20.86■□□□□ 0.93
CHKB-201ENST00000406938 ITPRIPL2Q3MIP1 535 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 MARC1Q5VT66 337 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 LINGO4Q6UY18 593 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 PID1Q7Z2X4 250 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 CNTD1Q8N815 330 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 CASKIN2Q8WXE0 1202 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 SNF8Q96H20 258 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 GDF3Q9NR23 364 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 RBM22Q9NW64 420 aaKnown RBP eCLIP20.86■□□□□ 0.93
CHKB-201ENST00000406938 TRHDEQ9UKU6 1024 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 UQCRHLA0A096LP55 91 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 ZBTB24O43167 697 aaPredicted RBP20.86■□□□□ 0.93
CHKB-201ENST00000406938 NEBLO76041 1014 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 HLA-DQB2P05538 268 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 UQCRHP07919 91 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 CISD3P0C7P0 127 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 GJA4P35212 333 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 MMP13P45452 471 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 SLC6A11P48066 632 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 KIAA0907Q7Z7F0 614 aaPredicted RBP20.86■□□□□ 0.93
CHKB-201ENST00000406938 IFT20Q8IY31 132 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 AHI1Q8N157 1196 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 TEX26Q8N6G2 289 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 RUBCNQ92622 972 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 NXPE3Q969Y0 559 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 ACDQ96AP0 544 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 TEKT5Q96M29 485 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 TTLL3Q9Y4R7 772 aa20.86■□□□□ 0.93
CHKB-201ENST00000406938 F5H423 210 aaPredicted RBP20.85■□□□□ 0.93
CHKB-201ENST00000406938 SEC31AO94979 1220 aaKnown RBP20.85■□□□□ 0.93
CHKB-201ENST00000406938 METTL18O95568 372 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 ASGR2P07307 311 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 CD68P34810 354 aaPredicted RBP20.85■□□□□ 0.93
CHKB-201ENST00000406938 BASP1P80723 227 aaKnown RBP20.85■□□□□ 0.93
CHKB-201ENST00000406938 GEN1Q17RS7 908 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 FAXCQ5TGI0 409 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 NAIF1Q69YI7 327 aaPredicted RBP20.85■□□□□ 0.93
CHKB-201ENST00000406938 C4orf22Q6V702 233 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 ADIPOR2Q86V24 386 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 LRRC45Q96CN5 670 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 CHFRQ96EP1 664 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 PARD6BQ9BYG5 372 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 GBA3Q9H227 469 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 RAB6BQ9NRW1 208 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 GRHL1Q9NZI5 618 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 IGSF9Q9P2J2 1179 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 DEC1Q9P2X7 70 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms