RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 OTOAQ7RTW8 1153 aa25.11■■□□□ 1.61
DNMT3A-206ENST00000406659 THOC1Q96FV9 657 aaKnown RBP25.11■■□□□ 1.61
DNMT3A-206ENST00000406659 ZNF419Q96HQ0 510 aaPredicted RBP25.11■■□□□ 1.61
DNMT3A-206ENST00000406659 RPRD1AQ96P16 312 aaPredicted RBP25.11■■□□□ 1.61
DNMT3A-206ENST00000406659 CHRAC1Q9NRG0 131 aa25.11■■□□□ 1.61
DNMT3A-206ENST00000406659 DNMT3LQ9UJW3 386 aa25.11■■□□□ 1.61
DNMT3A-206ENST00000406659 ITGA2BP08514 1039 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 RENBPP51606 427 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 SPRED3Q2MJR0 410 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 ZNF354CQ86Y25 554 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 RNF168Q8IYW5 571 aaPredicted RBP25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 PDZD8Q8NEN9 1154 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 MFSD3Q96ES6 412 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 ZNF512Q96ME7 567 aaPredicted RBP25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 HAUS2Q9NVX0 235 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 AFF4Q9UHB7 1163 aaKnown RBP25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 CAPN7Q9Y6W3 813 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 ATP5C1P36542 298 aaKnown RBP25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 SCTRP47872 440 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 HNRNPDQ14103 355 aaKnown RBP25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 TRIM42Q8IWZ5 723 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 ARMC2Q8NEN0 867 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 FATE1Q969F0 183 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 SP110Q9HB58 689 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 ENTPD7Q9NQZ7 604 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 C20orf96Q9NUD7 363 aaPredicted RBP25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 GGT7Q9UJ14 662 aa25.1■■□□□ 1.61
DNMT3A-206ENST00000406659 PMPCBO75439 489 aa25.09■■□□□ 1.61
DNMT3A-206ENST00000406659 RFC2P35250 354 aa25.09■■□□□ 1.61
DNMT3A-206ENST00000406659 PCID2Q5JVF3 399 aa25.09■■□□□ 1.61
DNMT3A-206ENST00000406659 NSMCE1Q8WV22 266 aa25.09■■□□□ 1.61
DNMT3A-206ENST00000406659 OVCA2Q8WZ82 227 aa25.09■■□□□ 1.61
DNMT3A-206ENST00000406659 CLSTN3Q9BQT9 956 aa25.09■■□□□ 1.61
DNMT3A-206ENST00000406659 KIFC1Q9BW19 673 aa25.09■■□□□ 1.61
DNMT3A-206ENST00000406659 NACA2Q9H009 215 aa25.09■■□□□ 1.61
DNMT3A-206ENST00000406659 RASSF4Q9H2L5 321 aa25.09■■□□□ 1.61
DNMT3A-206ENST00000406659 DOCK4Q8N1I0 1966 aa25.09■■□□□ 1.61
DNMT3A-206ENST00000406659 TPP1O14773 563 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 TROVE2P10155 538 aaKnown RBP eCLIP25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 TACR2P21452 398 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 BGNP21810 368 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 SPRP35270 261 aaPredicted RBP25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 TEDDM1Q5T9Z0 273 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 STRA8Q7Z7C7 330 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 KCNMB4Q86W47 210 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 GBP7Q8N8V2 638 aaPredicted RBP25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 DIS3LQ8TF46 1054 aaKnown RBP25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 PTPRN2Q92932 1015 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 ATP2A3Q93084 1043 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 ZNF558Q96NG5 402 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 TSSK1BQ9BXA7 367 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 FSD1LQ9BXM9 530 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 SLC25A51Q9H1U9 297 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 USH1CQ9Y6N9 552 aa25.08■■□□□ 1.61
DNMT3A-206ENST00000406659 H0YHG0 523 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 J3KR12 359 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 ALDOAP04075 364 aaKnown RBP25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 SOD2P04179 222 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 GSTA1P08263 222 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 NMBRP28336 390 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 ADRA1AP35348 466 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 KCNQ1P51787 676 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 POLD3Q15054 466 aaPredicted RBP25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 HSP90AA5PQ58FG0 334 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 FAM133BQ5BKY9 247 aaKnown RBP25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 MARC1Q5VT66 337 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 NADSYN1Q6IA69 706 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 TOP1MTQ969P6 601 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 RMDN2Q96LZ7 410 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 RXFP1Q9HBX9 757 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 NT5MQ9NPB1 228 aa25.08■■□□□ 1.6
DNMT3A-206ENST00000406659 RAMP2O60895 175 aa25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 SEC24AO95486 1093 aa25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 PEX11BO96011 259 aa25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 ALDH3A1P30838 453 aa25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 ITKQ08881 620 aa25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 MPP3Q13368 585 aa25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 FAM117BQ6P1L5 589 aa25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 PKN3Q6P5Z2 889 aa25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 CIR1Q86X95 450 aaPredicted RBP25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 PPHLN1Q8NEY8 458 aaKnown RBP25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 ZNF461Q8TAF7 563 aa25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 PABPC5Q96DU9 382 aaKnown RBP25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 TMEM169Q96HH4 297 aa25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 AGAP2Q99490 1192 aa25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 RBBP8Q99708 897 aa25.07■■□□□ 1.6
DNMT3A-206ENST00000406659 ABHD14A-ACY1A0A1B0GW23 586 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 F5H5T6 163 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 UBOX5O94941 541 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 CLTBP09497 229 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 MAPKAPK2P49137 400 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 TAF12Q16514 161 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 PARP15Q460N3 678 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 HECTD3Q5T447 861 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 STXBP5Q5T5C0 1151 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 SNX30Q5VWJ9 437 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 TPGS2Q68CL5 300 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 PDPK2PQ6A1A2 396 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 DENND5AQ6IQ26 1287 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 KYAT3Q6YP21 454 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms