RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 NAPRTQ6XQN6 538 aa16.52■□□□□ 0.24
CDKN1A-203ENST00000405375 SCD5Q86SK9 330 aa16.52■□□□□ 0.24
CDKN1A-203ENST00000405375 ZC3HC1Q86WB0 502 aaKnown RBP16.52■□□□□ 0.24
CDKN1A-203ENST00000405375 ATPAF2Q8N5M1 289 aa16.52■□□□□ 0.24
CDKN1A-203ENST00000405375 CXorf56Q9H5V9 222 aa16.52■□□□□ 0.24
CDKN1A-203ENST00000405375 STOML1Q9UBI4 398 aa16.52■□□□□ 0.24
CDKN1A-203ENST00000405375 TTC3P53804 2025 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 FGF10O15520 208 aaPredicted RBP16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 MSI1O43347 362 aaKnown RBP16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 PSMG1O95456 288 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 MT-CYBP00156 380 aaPredicted RBP16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 MYL4P12829 197 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 TYMPP19971 482 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 CCR1P32246 355 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 HADHAP40939 763 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 INHBEP58166 350 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 TSPY1Q01534 308 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 DENND5AQ6IQ26 1287 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 RGMBQ6NW40 437 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 ZNF598Q86UK7 904 aaKnown RBP16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 THEM5Q8N1Q8 247 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 LZTR1Q8N653 840 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 CASP10Q92851 521 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 FCRL2Q96LA5 508 aaPredicted RBP16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 FAM161BQ96MY7 647 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 OXCT2Q9BYC2 517 aaPredicted RBP16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 SLC39A8Q9C0K1 460 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 NMRAL1Q9HBL8 299 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 SFMBT1Q9UHJ3 866 aa16.52■□□□□ 0.23
CDKN1A-203ENST00000405375 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 F8W8V4 182 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 KLHL2O95198 593 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 GRM3Q14832 879 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 CMPK2Q5EBM0 449 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 BTBD8Q5XKL5 378 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 PKN3Q6P5Z2 889 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 PAXIP1Q6ZW49 1069 aaPredicted RBP16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 SAPCD2Q86UD0 394 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 TMEM151AQ8N4L1 468 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 TBL1YQ9BQ87 522 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 ARHGAP39Q9C0H5 1083 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 RHOJQ9H4E5 214 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 GLOD4Q9HC38 313 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 NDFIP2Q9NV92 336 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 NSMCE4AQ9NXX6 385 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 GABRQQ9UN88 632 aa16.51■□□□□ 0.23
CDKN1A-203ENST00000405375 MATN3O15232 486 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 INPPL1O15357 1258 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 TBX10O75333 385 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 GABRB3P28472 473 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 TRIM32Q13049 653 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 PPP2R5DQ14738 602 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 ANO4Q32M45 955 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 PCID2Q5JVF3 399 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 VWA5B1Q5TIE3 1220 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 AFMIDQ63HM1 303 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 CNTN4Q8IWV2 1026 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 SCUBE1Q8IWY4 988 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 ULK2Q8IYT8 1036 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 C1QTNF1Q9BXJ1 281 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 CATSPERBQ9H7T0 1116 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 STX18Q9P2W9 335 aaKnown RBP16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 BRCA2P51587 3418 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 KCNU1A8MYU2 1149 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 TMEM114B3SHH9 223 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 TRIM13O60858 407 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 ANXA9O76027 345 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 SLC10A3P09131 477 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 ADRA1AP35348 466 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 THOC5Q13769 683 aaKnown RBP16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 KCNA10Q16322 511 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 CCSAPQ6IQ19 270 aaPredicted RBP16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 SPATA2LQ8IUW3 424 aaPredicted RBP16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 CCDC117Q8IWD4 279 aaPredicted RBP16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 ZNF781Q8N8C0 355 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 GPATCH11Q8N954 259 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 CLPTM1LQ96KA5 538 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 NMUR1Q9HB89 426 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 SLC7A8Q9UHI5 535 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 SLC39A10Q9ULF5 831 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 CDY1Q9Y6F8 540 aa16.5■□□□□ 0.23
CDKN1A-203ENST00000405375 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 CCDC78A2IDD5 438 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 B4GALT3O60512 393 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 ARNTP27540 789 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 GRIK1P39086 918 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 ITGA7Q13683 1181 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 NET1Q7Z628 596 aaPredicted RBP16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 KLHDC9Q8NEP7 349 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 IPMKQ8NFU5 416 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 NRG4Q8WWG1 115 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 THTPAQ9BU02 230 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 CDH19Q9H159 772 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 BATF3Q9NR55 127 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 OXSMQ9NWU1 459 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 GEMIN8Q9NWZ8 242 aaKnown RBP16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 NYNRINQ9P2P1 1898 aaKnown RBP16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 ARHGEF37A1IGU5 675 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 AHSGP02765 367 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms